Calonectris borealis (Cory's shearwater): 142082246
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Entry
142082246 CDS
T11211
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142082246 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142082246 (EXOSC9)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
142082246 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
142082246
NCBI-ProteinID:
XP_075006347
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Position
4:complement(78758163..78763843)
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AA seq
441 aa
AA seq
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MKATPLSNCERRFLLRAVEERKRLDGRQCYDYRNVRISFGADYGCCIVELGKTRVLAQVS
CELVPPKPNRPTEGILFFNLELSPMAAPGFEPGRQSELLVKLNRLIERCLRNSKCIDTES
LCVVAGEKVWQIRLDLHLLNHDGNIIDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGLLVIAMNKHHEICTIQSSGGI
MLVKDQVLRCSKITAVKVAEITELIQKALENDQKVRKEGGKFGFAESIPNQKITTFKMES
AAVDTNNVEEQAEEIITKADPPSEVFAKPILHTPGTAQIGEGIENSWGDLEESEREEAAE
EEGESEAAAFECQKMETEDTSTMRETKKDEPIVLSDSEEEEVVILEPQELPKKTRTQTNL
KQENTSKKAFNKRRRKKRAAH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgacgccgctttccaactgcgagaggcgcttcctcctgcgcgccgtcgaggag
aggaagcgcttggacgggcggcagtgctatgactaccggaacgtgcgcatctccttcggc
gccgactacggctgctgcatcgtggagctggggaagaccagggtccttgcacaagtctcg
tgtgaacttgttccccccaagccaaatcggcctacagaaggtatacttttctttaatctt
gagctctcaccgatggctgcacctggttttgagcctggcaggcaatctgagttactggtg
aaactgaacagactgatagaacgatgcctgagaaattctaaatgtatagatactgaatct
ctctgtgttgttgctggtgaaaaggtttggcaaattcgtctggacctgcacttgctaaat
cacgatggtaacattattgacgctgctagcatagcaggaattgtagctctgtgtcatttt
cgcagaccagatgtgtctgtgcaaggagaggaagtaactgtgtacactcctgaggaacgt
gatcctgtccccttgagtatccaccacatgcctatttgtgtcagttttgccttcttccag
caagggacctatttattggtggatccaagtgagcgcgaggaacgcgtaatggatggcctc
cttgtaattgccatgaataaacatcatgaaatttgtaccatccagtccagtggagggatt
atgctagtaaaggatcaggttctgagatgcagtaaaataacagctgttaaggttgcagaa
ataacagaactaattcaaaaagccttggagaacgaccagaaggttaggaaagaaggtggg
aagttcggctttgcagaatctatacccaatcaaaagatcaccacattcaaaatggaaagc
gctgctgtcgatactaacaatgtggaagagcaagcagaagaaatcatcactaaggctgac
cctccttcagaagtttttgccaaaccaatattgcacactcccgggacagcccaaattggg
gaaggaatagagaactcctggggagaccttgaagaatctgagagggaagaagcagcggaa
gaggaaggcgaaagtgaggctgccgcttttgaatgtcagaaaatggaaactgaggataca
agtacgatgagggaaacgaagaaggatgaacctattgtactgtctgacagtgaagaggaa
gaagttgtcattctggaaccacaggaactaccaaagaaaacaagaacacagaccaacttg
aaacaagaaaatacaagtaagaaggcatttaacaaaaggagaagaaagaagagagctgct
cattaa
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