Calonectris borealis (Cory's shearwater): 142082302
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Entry
142082302 CDS
T11211
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142082302 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142082302 (NUP54)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142082302 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
142082302
NCBI-ProteinID:
XP_075006491
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All DBs
Position
4:83432694..83449143
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AA seq
500 aa
AA seq
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MAFNFGATAGAGAANPTGAFGGFGTTTTTAGPAFSFSAPTNTGTSGLFGAAQNKGFGFGT
SFGTGTGTGFGSGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPAQSNQLINTASALSAP
TLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDE
DGLVVLVFNRKEIDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVVER
SPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPI
IWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTT
TMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQF
KGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLED
IKLIEHGLNESIPIRGGVFS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggcgacggcgggcgccggtgccgccaacccgaccggtgcgttt
ggaggatttgggacaactactaccactgcgggaccagcatttagtttttctgctcccacc
aatacaggcaccagcggactctttggtgctgcccagaacaaaggctttggatttggtact
agttttggcacaggaactggaactggctttggtagtgggctgggaactgggctaggcttt
ggaggctttggtacgcagcagcaacagaccacattaggaagtggcttgttcagccagcct
gctcagacacctgcccagtcgaaccagctcatcaatacagccagtgccctctcggctccg
acactcttaggagatgagagagatgctattttggctaagtggaaccagcttcaggccttc
tggggaacaggcaaaggctacttcaacaataacatcgctccagtggagttcacgcaggaa
aaccccttttgccggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaa
gatggcctcgttgtcttggtcttcaaccgaaaagaaatagatattcgaagccagcagcag
cagctcgtagaatcactacacaaaattctgggaggaaaccagaccctcaccgtcaatgta
gaaggtgttaaaacgatgccagatgaccagacagaagtgatcatttacgttgttgagcgc
tcgcccaacggcacttcgaggagagttcccgcaacgaccctctacgcccactttgaacaa
gccaacataaaatcgtccctgcagcagctgggggtcagcctctccatggccagaacggag
ctttccccagcacaagtcaaacagctcctgcagaaccctcctgccggtgttgatcctatt
atatgggaacaagccaaagttgataatcctgatcctgacaagcttattcctgtgccaatg
gtgggtttcaaggaactgctgagaagattgaaggtccaagatcagatgaccaaacagcat
caaactcgattagatataatatcagaagacatcagtgagctgcagaaaaaccaaacgaca
actatggcaaaaatagcacagtacaaaaggaaactgatggcgctttctcacagaacgtta
caggtgttaataaagcaggagatccaaaggaaaagcggttatgccattcaagcggacgaa
gagcagcttcgtgtacagttagatacaattcagtgtgaacttaatgcgcctacgcagttt
aagggcagactaaatgagctcatgtcccaaatcaggatgcaaaaccactttggagcagtg
cgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacatctg
aagcagcagcaagaaggcctgagtcacctaattagcattataaaggatgacttggaggac
atcaaacttatagaacatgggctgaacgagagcattcccatcagaggaggagtcttcagt
tga
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