Calonectris borealis (Cory's shearwater): 142082376
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Entry
142082376 CDS
T11211
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142082376 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142082376 (SIGLEC1)
04090 CD molecules [BR:
cbor04090
]
142082376 (SIGLEC1)
04091 Lectins [BR:
cbor04091
]
142082376 (SIGLEC1)
Cell adhesion molecules [BR:
cbor04515
]
Immunoglobulin superfamily
SIGLEC family
142082376 (SIGLEC1)
CD molecules [BR:
cbor04090
]
Proteins
142082376 (SIGLEC1)
Lectins [BR:
cbor04091
]
I-type lectins (Siglecs)
142082376 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Izumo-Ig
Ig_5
Ig_4
C1-set
C2-set_2
Ig_CD22
C2-set
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
142082376
NCBI-ProteinID:
XP_075006599
LinkDB
All DBs
Position
4:660368..678384
Genome browser
AA seq
1682 aa
AA seq
DB search
MRLPRCLILLASLVPPALGSWGVTYPELLRGVRDSCVVVPCTLSYPANVADGDGVVAIWY
KDYDSQKTLVYHSATQEVDAHFRGRAQLLGDPAARNCTLLLRGVTPEDSGPYRFRFEIVN
GDRWSAARDVMLRVSDDLERPSTAASEEQTEGQTSTLECSTPYICPPGDVALRWEGYDPQ
VSAVSSRVQMDTSGVGHYLNLTTSFSWKDHSKKLLCEVSYGSRKATGEVVLRVRHAPKDT
QVLVRPPAQNIRVGDTVSLSCEVSSSYPPVSAYHWYKDGAAVGSERILTLRGVRREDYGQ
YRCEAENAVGAGAAPAVTLYVFSAEISVSPAAEVREGTATTLSCDVPGREDQDLNYTWYK
NSAWLKEGTAHTLLFHHVAASDTGYYSCKVTNDHGSDTSQAISLSVTYPPRTPTITLFQE
TQGGRLAIVYCAVDSHPPATMALYRDGTLLAASGLQAAPRQRLGVTASRNALRLEIRGVG
PQDSGEYRCTASNAYGNASAAKPFLARATEVLIQPSAEVREGTAVTLTCRGAGGAAEETL
YTWYRNSKRLRESSVPMLRFPSVRGEDAGAFQCRVRSSNGSDTSAAVPLRVLFPPRQPVM
SSFLETQDGRLGIIQCTVESDPEANLTLWRGEEVIACTRGCPTAPNPRVHATLSYNSLKV
EMREVVLEDEGTYVCRAGNPQGNASAAVDFRAETASVAVAPSSRVLEGQAANLTCRLSSD
SPALPNFTWYQNGQRLAEGSAASLVFRQVASTDAGLYHCRATTEGSSRSSPAVSLDVLYP
PRDARLTAFLETERGRLAIFQCLVASNPPARLALHRGEELVAASDGGSSPSPRVSVSAAP
NALRVEIREVTPADEGSYRCTATNAHGTAARRLYFRVETARVLVSPSAEVREGDDVSLTC
QVAGEPQDDTVYSWYKNSERLQESPDSLLALPRIPSAAAGSYHCRARGPAGTSISPAVAL
RVSYPPRVPVLTSFLETPEGQRGVLQCTVDSSPRAELALFKDQALVASTALPQPTAPPRL
SVALAFNTLRVSILPVLLEDEGEYVCTASNAYGNASTAANFTAGTARVWISPSPDVREGG
IVNLTCAVESGGEEALSYTWYKNKVWFSSGPSPSLAFPSVAAADAASYHCTVRTPARTRS
SAPTTLNVLYPPRNLQMKAFVESGEGTAVILLCAVESNPLSEITLLKGGQPVASSPPAGG
DHPGRSGHISPTPNALRLELREASEEDEGEYECRARSALGSTHASLPLRVQAVRVVVRPS
AEVPEGTDVTLTCRDVGAHPGTLYTWYKNGRWLAEGLDASLVLPAARRTDAGAYACQVGR
GLRGRRAPPAALRVLYAPREPSFISLVEPRGGRQAALLCTVDSFPPSDIALHRGPGHAPL
ASTRGPADPRFTVQAAPNSLRVGMGGLEPRDAGLYVCSANNSYGTASSSLRLDVGGVTVT
IEPSPEVPEGTTATMTCSAIPWVGEEANYTWYKNSRWLREGPAGSLVLARVSSTDTGSYR
CRASGTRGSAASAPLSLSVLYPPRDVSVSTFLENRSGRVGIVLCTADSHPASTIALYRRG
QLLASSLAPAAAPGLHASPSHNALRVELGAVGPEDSGEYTCVAGNLLGNATASAYFNVRT
LAHLLAFTVLAGLLTAVICVAALALLAVKLWPRMRKFWGWSGAEDTFELRSKQEQAQVDG
AS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgccccggtgcctcatcctcctggccagcctcgtcccgccagccctcggctcg
tggggggtcacctaccccgagctcctgcgcggtgtcagggactcctgcgtggtggttccc
tgcaccctgagctaccccgccaacgtggcggacggcgacggcgtcgtggccatctggtac
aaggactacgacagccagaagacgctggtgtaccactcggcgacccaggaggtggacgct
cacttcaggggccgtgctcagctcctgggggaccccgctgctcgcaactgcaccctgctg
ctgcggggggtgacgccggaggacagcgggccctacaggttccgcttcgagatcgtcaac
ggtgaccggtggtcggcggcgcgggatgtgatgctgagagtttcggatgacctcgagcgc
ccgagcactgctgccagcgaggagcaaaccgaggggcaaacgtccaccttggagtgctcc
acaccctacatctgcccgccgggcgacgttgccctgcgctgggagggctacgacccccag
gtctcggcagtgtccagccgggtccagatggacacaagcggggtcggccactacctgaac
ctcaccacctccttctcctggaaggatcactccaaaaagctgctctgtgaagtttcttat
ggttccaggaaggcgaccggggaggtcgtcctgcgggtgagacacgcccctaaggacacc
caagtgttggtcagaccccccgcgcagaacatccgcgtgggcgacacggtctccctctcc
tgcgaggtgagcagcagctacccccccgtctcggcgtaccactggtacaaggacggggcg
gccgtgggcagcgagcggatcctgaccctccggggcgttcgccgcgaggactacgggcag
taccgctgcgaagccgagaacgccgtcggggctggcgcggcgcccgccgtgacgctctac
gtcttctctgcagagatctcggtgagccccgcggccgaggtgcgggaggggacggccacc
accttgtcctgtgacgtccctggcagggaggaccaggacctcaactacacctggtacaag
aacagcgcctggctcaaggagggcacggcgcacaccctgctcttccaccacgtagccgcc
agcgacaccggctattattcctgcaaggtgacaaatgaccacggcagtgacacatcccag
gccatcagcctgagcgtgacataccccccccggacccccaccatcacgctcttccaggag
acgcagggtggcaggctggccattgtctactgcgccgtggatagccaccccccggccacc
atggccctttaccgcgatggcaccttgctggcggccagcgggttgcaggcggccccgcgc
cagcggctcggcgtcaccgcctcccgcaacgccctgcggctggagatccgtggcgtgggg
ccgcaggacagcggggagtatcgctgcacggccagcaacgcctacggcaacgccagcgcc
gccaagcccttcctcgcccgtgctacagaggtcctgatccagccctcggcagaggtgcgg
gaagggacggccgtcaccctgacctgccggggggctgggggcgcggcggaggagaccctc
tacacctggtacaggaacagcaagcggctgcgggagagctcggtcccgatgctgcgcttc
ccctccgtccgcggcgaggacgcaggcgctttccagtgcagggtccggagcagcaacggc
agcgacacgtcggcggccgtcccgctccgtgtgctcttcccaccgaggcaaccggtgatg
agctccttcctggagacccaggacgggcgcctgggcatcatccagtgcaccgttgagagt
gacccagaggccaacctgaccctctggagaggagaagaagtaatagcctgtacacggggc
tgccccacagcccccaaccccagggtccacgccaccttgtcctacaacagcctgaaggtg
gagatgcgggaggtggtgctggaggacgaggggacctacgtgtgccgggctgggaacccg
cagggcaacgccagcgcggccgtggacttcagggctgagactgccagcgtcgcagtggct
ccgtcctcccgcgtgctggaaggtcaagccgccaacctgacctgccggctgagcagcgat
tccccggctctgcccaacttcacctggtaccaaaacgggcagcggctcgccgagggctcg
gccgcctccctggtgtttcggcaagtggccagcacggacgcgggtctctaccactgcaga
gccaccaccgagggcagcagccggagctcccccgccgtctccctggacgtgctgtacccc
ccgcgggacgcccgcctgacggccttcctggagacggagagaggccgcctggccatcttc
cagtgcttggtggcgagcaaccctcccgcccggctggccctgcaccggggcgaggagctg
gtggccgccagcgatggggggagcagccccagcccgcgggtcagcgtctcggccgccccc
aacgccctcagggtggagatccgggaggtgacgccggcggacgaaggcagctaccgctgc
acggccaccaacgcgcacggcacggcggcccgccgcctgtacttccgcgtggagactgcc
cgagtcctcgtctcgccgtccgcggaggtgcgggaaggagacgacgtctccctgacgtgc
caagtggcgggagagccgcaggacgacaccgtctactcctggtacaagaacagcgaacgg
ctccaggagagccccgacagcctcctcgccctgccccgcatccccagcgccgccgccggc
tcctaccactgccgagcccgcggccccgcggggaccagcatctccccggccgtcgccctg
cgcgtctcctatcctccgcgggtgccggtgctgacctccttcctggagacccccgagggg
cagcggggcgtcttgcagtgcacggtggacagcagcccgcgggcagagctggctctcttc
aaggaccaggcgctggtggcctccacggcgctgccccagcccaccgccccgccgcggctc
agcgtcgccttggccttcaacacgctgcgggtcagcatcctgcccgtgctgctggaggac
gagggggagtacgtctgcaccgccagcaacgcctacggcaacgccagcacggcggcgaac
ttcacggcaggcactgccagggtctggatctccccctccccggacgtccgggaaggcggc
atcgtcaacctgacctgtgcggtggagagcggcggcgaggaagcgctgagctacacctgg
tacaagaacaaggtctggttcagcagcggcccgtccccgtccctcgccttccccagcgtc
gctgccgccgacgccgcctcctaccactgcacggtgcggaccccggcgcggacccgcagc
tctgcccccaccaccctcaacgtcctctacccccccaggaacctgcagatgaaagccttc
gtggagagcggcgaggggacggcagtcatcctcctctgcgccgtggagagcaaccccctg
tccgagatcaccctgctcaagggggggcagccggtggcctccagcccccccgcgggaggt
gaccaccccgggcggagcggccacatctcccccactcccaacgcgctgaggctggagctc
cgggaggcttccgaggaagacgagggcgagtacgagtgccgggcacgcagcgctctcggc
agcacccacgcatccctgcccctccgtgtgcaggccgtcagggtggtggtgagaccctct
gccgaggtgcccgaggggaccgacgtgacgctgacctgccgggacgtgggtgcccacccg
ggcaccctctacacctggtacaagaacgggcggtggctggcggaggggctcgacgcctcc
ctcgtcctccccgctgcccgccgcacggacgcgggtgcctacgcctgccaggtggggagg
gggctgcgcggccgccgggccccccccgccgccctgcgggtgctctatgcaccccgggag
ccatccttcatctccttggtggagccccggggggggcggcaggccgccctgctctgcacc
gtcgacagcttcccaccctccgacatcgccctgcaccggggtcccggccacgcgcccctg
gcctccacgcggggcccggccgacccacgcttcaccgtccaggcagcccccaactccctg
cgggtggggatgggggggctggagccgcgggacgcggggctctacgtctgctcggccaac
aacagctacggcaccgcgtcctcgtccctgcgcctggacgtgggaggggtcacagtgaca
attgagccctcgccagaagtccccgaaggcaccacggccaccatgacctgctcggccatc
ccttgggtgggggaagaggccaactacacctggtacaagaacagccggtggctgcgggag
ggaccggccggctccctcgtcctcgcccgcgtctccagcaccgacaccggctcctaccgc
tgccgggcgagcgggacacggggcagcgccgcctcggccccgctcagcctcagcgtgctc
taccccccccgggatgtgtccgtcagcactttcctggagaaccgcagcgggcgggtgggc
atcgtgctgtgcacggctgacagccacccggcttccaccatcgccctgtaccgccgcggc
cagctcctggcctccagcctggccccagccgctgcgccggggctccacgcctccccctcc
cacaacgccctccgcgtggagctgggggccgtggggccggaggactcgggggaatacacc
tgcgtggctggcaacctcctgggcaacgccacggccagcgcctacttcaacgtgcgcact
ctcgcccatctcctggccttcaccgtcctggctgggctgctgacggccgtgatctgcgtg
gctgccctggccctcctggctgtgaagctgtggcccaggatgaggaagttttggggctgg
tccggtgccgaggacaccttcgagctgaggagcaaacaggagcaggcacaggtggatgga
gcttcttaa
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integrated database retrieval system
