KEGG   Calonectris borealis (Cory's shearwater): 142082608
Entry
142082608         CDS       T11211                                 
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbor03036]
    142082608 (WDHD1)
Chromosome and associated proteins [BR:cbor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    142082608 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 HMG_WDHD1 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I HMG_box Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th eIF2A Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_Nup120_160 NBCH_WD40 HMG_box_2 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 142082608
NCBI-ProteinID: XP_075006882
LinkDB
Position
5:complement(4883194..4913184)
AA seq 1123 aa
MPSAQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVIFNSDGTKIAAGSSDFMVKV
VEVTDSSKQKTLRGHDAPVLSLSFDPRNVYLASASCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRETWDSQFDLSDTFITQPLNVVAWSP
CGQYLAAGSVDGSIVVWNVETQDCIERMKHEKNYSICGLAWHPKYRQIAYTDTEGNLGLL
ENIGDGKKPNDKVASTLTKDYNDLFDGEDDDYLNGDMIEPQSSPRAGANEDDADDGDLML
TSGHLRRAIIDDDDNSLDIGVIKANSNLLEKEDDDDDQTGGFPALPPSSTQQPFYDGPMP
TPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNSLN
HTMADLSTEAILLACESTEELASKLHCIHFNSWDANKEWTVDMPKDEDIEAICLGQGWAA
CATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIIYHRGTGFDGDQCLGVQLMEL
GKTKKQILHGDPLSLTKKSYLIWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNMRE
HCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQME
EQYWRSVVFHNHVDYLSKNGYELDENAKSQSMKEQQELLMKLFALSCKLEREFRCVELAD
LMTQNVVNLAIKYASRSRRLNLAQRLSEMAVEKANELAAAPEDEEEEEDFRKHLGAGYSN
TATEWSRLPVRNVQQDQEMEDAEETDAYEEVEETPEVHKQKPNPFSKGVASAEVTTPKSV
VIASSSQGRVNPFKVSSNKKDSVVPSANVLDTMSKYSKKTSLSSSRAVNKQNPPVIKPLI
PKPKSKQALAASFFQARTPNSNEKTVEEREEKAGNESHEVKVTAQENTENKRPKTGFQMW
LEENRANILTDNPDLNEAEVIKEGMSRFRMLSSEERMVWTEKAKGGMVNDLTEDKKRKRP
TADEDEAKKNREQKSEDSNLSKKPKPLDQSTNVRLSAFAFKQS
NT seq 3372 nt   +upstreamnt  +downstreamnt
atgccttctgcgcagaagccgatgcggtacggccacaccgagggccacacggacgtctgc
ttcgatgacacggggagctgcattgtcacttgtggtagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccgaagtccattaatgtgggagaaaaggcctattcatgc
gctctaaagaatggaagactgatcacagcagtatcaaacaatactgttcagatacataca
tttcctgaaggagctccagatggtatccttactcgtttcaccatgaatgcaaaccacgtc
atctttaatagcgatggtaccaaaattgctgctggatctagtgatttcatggtcaaagtt
gtggaggtgactgatagcagcaagcagaaaacattgcgaggacatgatgctcctgtttta
agcctgtcttttgaccccaggaatgtttacctggcatcggcgagctgtgatggttctgtc
agagtatggaaaatcgcagatcagacatgcacgacaagctggccgctgttgcagaaatgt
aacgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcagtgggaag
ttgctggcaattcctgtagataaagttgttaaactatacagaagagaaacctgggatagt
caattcgatctatcagatacattcatcacacagcccttgaatgttgtggcctggtctcct
tgtgggcagtatctggcagctggaagtgtggatgggagtatagtggtgtggaatgtggaa
acccaggattgcatagagaggatgaagcatgagaaaaattactcaatttgtggactggca
tggcaccccaaatacaggcaaatcgcttatacagatactgaaggaaatctgggattgttg
gaaaatatcggtgatggaaagaaaccaaatgacaaggttgccagtacattgacaaaggac
tacaatgatctctttgatggagaagacgacgactatttaaatggagatatgattgaacca
cagtcttccccaagggctggagctaatgaagatgatgctgatgatggggaccttatgcta
acttcaggccatctgagacgggcaataattgatgatgatgataactcactagatattggg
gtgataaaagctaattccaatcttcttgaaaaggaagatgatgatgatgatcagactggt
ggctttccagctttaccaccatcatctacacaacagcctttctatgatgggccaatgcca
acccccaagcaaaagccgttccagtctggctccactcctgcacatctcatgcatcgcttc
atggtatggaattctgttggtatcattcgctgttacaatgatgagcaagacaatgctata
gatatagaatttcatgatacctccatacatcatgcaacacacctgccaaactctctgaat
cacacgatggctgacctctctaccgaagctattttactagcctgtgaaagtacagaggaa
cttgcaagcaagctccactgcattcattttaactcatgggatgcaaacaaggagtggaca
gtagatatgccgaaggatgaagacattgaggctatctgtctaggtcaaggctgggctgct
tgtgccactagtgccttgctagttcgtgtgtttacagttggaggagttcagaaagagatc
ttcagtctcccaggtccagtggtgtctatggcaggacatggagagcagttgatgattatt
tatcacagaggtactgggtttgatggggaccaatgcctcggagtacagctgatggagcta
ggaaaaacgaaaaaacaaattttgcatggagaccctctttctcttacaaagaaatcctat
ttgatatgggttggattctctgcagaaggtaccccttgttacgtggattctgagggaatt
gtgcggatgttgaaccgaggacttgggaatacttggattccagtgtgtaacatgagagag
cattgcaaaggaaaatctgatcattactgggtggttggcatccatgaaaatccccagcag
ctcaggtgtattccttgtaaaggagcccgattccctcctacgctcccacggcctgctgta
gcaatattatcttttaaacttccttactgtcaagttacaacagaaaagggacagatggag
gaacagtactggcgttctgtggtatttcacaaccatgtggattacttatcaaaaaatggc
tatgaacttgatgaaaatgctaaaagtcaatcgatgaaagaacagcaagaacttctaatg
aagctgtttgccctttcttgtaaactggagcgtgaatttcgttgtgtggaacttgctgac
ctcatgacacaaaacgttgtgaatttagctatcaagtatgcttctcgctctcgaagacta
aatttagctcagcgacttagtgaaatggctgtagagaaagcaaatgagttggcagcagca
ccagaagatgaagaggaggaagaggatttccgaaagcatttgggtgctggttacagcaac
actgccacggagtggagtcggctgccagtcagaaatgttcagcaggaccaagaaatggaa
gatgctgaggaaactgatgcctatgaggaagtagaagaaacaccagaagtgcataaacaa
aagccaaatcctttctccaaaggtgttgcttcagcagaagtgactactccaaagtctgtt
gtaattgcatcaagcagccaaggaagagtgaatccctttaaggtgtcatctaacaaaaag
gactcagtggtcccctcagcaaatgttctagacactatgagcaaatactcaaagaaaact
tctttgtctagcagtcgagctgtaaacaagcagaaccctccagttataaagcctctcatt
cccaaacccaagtccaagcaggctttagcagcctccttcttccaggctcgtacacctaac
tccaatgaaaaaacagtggaagaaagagaagaaaaagcaggaaacgagtcccatgaagtc
aaagtcactgcacaggagaacactgaaaacaaaagaccaaagacaggattccagatgtgg
ctagaagagaacagagcaaacattttgacagataatcctgatctgaatgaagcagaagta
ataaaagaaggcatgagtcgatttagaatgctgtcgtcagaagaaagaatggtgtggact
gagaaagcaaaaggaggaatggttaatgatttaacagaagataaaaagcgaaagcgtccc
acagctgatgaagatgaagcgaaaaagaatcgggagcaaaaatcggaggactcaaattta
tccaaaaaaccaaagcctttagatcaatctacaaatgtcagattgtcagcttttgcattc
aagcaaagctaa

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