Calonectris borealis (Cory's shearwater): 142082970
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Entry
142082970 CDS
T11211
Symbol
PALS1
Name
(RefSeq) protein PALS1 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04519
Cadherin signaling
cbor04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
142082970 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
142082970 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
142082970 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
PDZ domain-containing proteins
MAGUK family proteins
142082970 (PALS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
142082970
NCBI-ProteinID:
XP_075007957
LinkDB
All DBs
Position
5
Genome browser
AA seq
675 aa
AA seq
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MTTSHMNGHITEDSDSEAKNVDLASPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TLEVEELLTSLKHIQHILVDPQSQEDISLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPVTDE
KIYENVGVYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFISRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatatcacagaagattctgacagtgaagcaaaaaat
gtggatcttgcatctcctgaagaacctcagaagcacagagaaatggctgttgattgccct
ggggatttgggctccaggatgatgcccatgaggcggagtgctcaacttgagcgaatccgt
cagcagcaggaggacataaggcgcagacgggaagaagagggaaagaaacaagaactggac
cttactgcttccatgaggctaaagaaactagcacaaattccgcctaaaactggaatagat
aatccgatatttgacacagaagaaggaattgttttggagagtcctcattatactgtgaag
acactagaagtggaagaactgttaacttctcttaagcatatccagcacattttggtagac
cctcagagccaagaggatatctctctcattttacagcttgttcaaaatactgattttcag
aatgcatttaagatacacaatgctgttacagtgcacatgaacaaagccagccctccatat
cctctcatctccaatgcacaagaactagcgcaagaggtacagagtgttttgaaacccagt
caccataaggatgggcaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ttactggctcatgataaggttgcggaacaagaaatgcaaccagagcctgtgacagatgaa
aaaatttatgaaaatgttggcgtgtacggaggggagacagttaaaatagttcgcattgag
aaagctcgggatattccattgggtgctactgttcgcaatgaaatggattctgttatcatt
agtcgaatagtgaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttctggagattaatggtattgaaattcgtggaaaagatgttaatgaagtttttgacttg
ttggctgacatgcatggtactctgacctttgtgttgattcccagtcagcagagcaagcca
cctcctgcgaaggagacagttatacatgtgaaagcgcattttgactatgatccctctgat
gacccttacgtcccttgccgagagttaggcctatcttttcaaaaaggagatatactccat
gtgatcagccaagaagatccaaactggtggcaagcttacagagatggagatgaagataat
cagccattggcaggccttatccctggaaaaagttttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagccagaaaaatcaggaaaactctggtgtgcgaagaaa
aacaaaaagaaacggaaaaaggttttatacaatgcaaataaaaatgatgattacgacaat
gaggaaattttgacctacgaggaaatgtcactgtatcatcaaccagcaaataggaaacgg
cctattgttctgatcggcccacagaactgcggccaaaatgaattgcggcagcgacttatg
aataacgaagtggatcgctttgcctctgcagttccccatactactcggagcaggcgagag
acagaagtagctggcagggattaccatttcatttcccgacaggcatttgagagtgacata
gctgcaggaaagttcattgaatatggagagtttgaaaagaacctctatggtactagcata
gactccgtgcggcaagtaatcaactctggcaagatatgccttttaaatcttcatacccag
tcactgaagacactacgtaattctgacttgaagccatatattatatttgttgcaccacct
tcacaagaaagattacgtgctttattggccaaagaagggaaaaacccaaagccagaagag
ctgagagaaatcatagagaagacgagggagatggaacagaacaatggccactactttgat
acagcaattgtgaattctgatctcgataaggcgtatcaagagttgcttcggttaataaac
aaacttgacacagaaccccagtgggtgccctctacctggctacgatga
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