Calonectris borealis (Cory's shearwater): 142082988
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Entry
142082988 CDS
T11211
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04517
IgSF CAM signaling
cbor04518
Integrin signaling
cbor04519
Cadherin signaling
cbor04520
Adherens junction
cbor04530
Tight junction
cbor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142082988 (ACTN1)
04518 Integrin signaling
142082988 (ACTN1)
04519 Cadherin signaling
142082988 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142082988 (ACTN1)
04520 Adherens junction
142082988 (ACTN1)
04530 Tight junction
142082988 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142082988 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142082988 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142082988 (ACTN1)
04147 Exosome [BR:
cbor04147
]
142082988 (ACTN1)
Membrane trafficking [BR:
cbor04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142082988 (ACTN1)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142082988 (ACTN1)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142082988 (ACTN1)
Exosomal proteins of colorectal cancer cells
142082988 (ACTN1)
Exosomal proteins of bladder cancer cells
142082988 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
142082988
NCBI-ProteinID:
XP_075008011
LinkDB
All DBs
Position
5:complement(38761181..38853751)
Genome browser
AA seq
892 aa
AA seq
DB search
MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcactacgacccgcagcagaccaacgactacatgcagccggaggaggactgggac
cgggacctgctcctcgacccggcctgggagaagcagcagaggaagacgtttacggcatgg
tgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct
gaaagaggcaaaatgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcatt
gccagcaaaggagtcaaactagtatctattggagcagaagaaattgtggatggcaatgtc
aaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatctca
gttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccc
tacaaaaatgtaaacatccagaacttccatatcagttggaaggacggccttggtttctgc
gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggatgat
cctctcactaatctaaacacagcttttgatgtggctgagaaatatctggatattcccaag
atgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cgtatctgcaaggtgctggcagtcaaccaagaaaacgaacagctcatggaagactatgaa
aaactggccagtgatctgttggagtggatccgtcgcaccatcccctggctggagaaccgg
gccccagagaacaccatgcaagccatgcagcagaagctggaggacttccgggactaccgc
cgcctgcacaagccccccaaggtccaagagaagtgccaacttgagatcaatttcaacacc
ttgcagaccaagctgcggctcagcaacaggccagccttcatgccttcagaagggaaaatg
gtctcggatataaacaatgcctggggtggtctagagcaggctgagaagggctatgaggag
tggttgttgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg
cagaaggcatctattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaag
gattacgaaactgctaccctctcggagataaaggccctgctgaagaaacacgaggccttt
gagagcgacctggctgcacaccaggaccgtgtggaacagattgctgctattgcacaagag
ctgaatgagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgt
gatcagtgggataatctgggtgccctaacccagaaacgtagagaagccttggagaggaca
gagaagttactggaaacaattgaccagctgtacctggaatatgccaaacgagctgcccct
ttcaataactggatggaaggggccatggaggacctgcaggacacgttcattgttcacacc
attgaggagatccagggattgaccacagcccacgaacagttcaaagccactttgccagat
gccgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtccag
acataccacgtcaacatggcaggaacgaatccttacactacgatcaccccacatgagatc
aatggcaaatgggaacatgtgcggcaactggttcccagaagggaccaagccctgatggaa
gaacatgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat
gtcattggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg
catgggaccctggaggaccagctcaaccacttgcggcagtatgagaaaagcattgtgaat
tacaaaccaaagattgaccagttggaaggagaccaccaacagatccaggaagcgcttatc
tttgacaacaagcacaccaactacaccatggagcatatccgagtgggctgggagcagtta
ctaacaacaattgctagaaccatcaacgaagtggaaaaccagattttgacccgtgatgcc
aaaggaatcagccaggaacagatgaacgagttccgggcttctttcaaccatttcgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtcgac
cctaaccgcttgggtgtagtgacgttccaggccttcatcgacttcatgtcccgggaaaca
gcagatacagatactgctgaccaggttatggcctccttcaagatcctggctggagataag
aactacatcactgtggatgaactgcggcgggaactgcctcctgatcaggctgaatactgc
attgctagaatggcaccctacaatggccgtgatgctgtacccggtgccctggactacatg
tccttctccacggcactctacggcgaaagtgacctttaa
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