Calonectris borealis (Cory's shearwater): 142083045
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Entry
142083045 CDS
T11211
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbor03009
]
142083045 (UTP20)
Ribosome biogenesis [BR:
cbor03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
142083045 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
142083045
NCBI-ProteinID:
XP_075008183
LinkDB
All DBs
Position
1:53916210..53980856
Genome browser
AA seq
2796 aa
AA seq
DB search
MKSKSSAHKSGNTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFFEGLRKWRELNL
TQHFVQFYSEVANKCQSFNQLVYYQSTIVQSLKTHLQIEGSLAYQPLLDLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNAIFNFMLRDLGEHPEKVEGVGQLLFEMCKGVRNMFH
SCVETAMKLILLKLGPITEEEIELPWVTVGEAFEQMIRSAVVHIHKEHFDIVFKCLEESL
LDLQRKITKANCCMASEQMERILQAYLILVEYANGSKISLPEDVCRILIKMLQTPDLSSS
CCKTLLNTISAFLLAENVFLPDSLTKEAIEKVFASGFEWRFLLDFSEAMFTMKQFERHFL
PCFLEYMEHCFSGTDALTKDEAMAILAKLILVKAEPPTIGSMAFEKYPLIFTESPLSSNT
RQQTSKRQGGKAEVPVLDHVLSLIHLPEKEDITDLSQPWVALVVLPHIRPMDKENILPRV
TSFIDSLFTAIDKGSLCKGSLFVACQAVSTLLSLAESSEILHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSPGNLMDLFEKLHPNISTGVSKVRLLTVRILNHFENPP
PTQIEGNGTGELQPIFAILLQAELVPATVNDYREKLLHLRKLRCDVVQSAIPSGSLQEVP
LRYLLGVLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAATYAEMELQNELDE
QEESIAETESEKMPEGGVGIVFLEQLRARTDCSERLDHTNFRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRKKTSGTVAAKEIQGEELNDVAMEEEEEEEEK
EEGEPITVGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQNV
QRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETAVVKMEHRPDLIPVL
MRILYGRMRNKTGSKTQGKSSAGTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGSC
QTAVLQSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIHQYLPEILQILLCMTAVVSC
ILQQREKIQPRLINPLKNLRRLGLKLVAEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLA
SESQYSPTFLLKLIHTWSKNPRYFPLLAKQQPDHPECDILSNVFAVLSAKNLSEATSSLV
MDIADSLLNSPDFEPTEQVSSLSVTDCVVMVAGDVTEETLSLGCRLVLPHVPAILQYFSK
TMLNVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTEID
ILETVQNLLRHCSNPTGFLKPLAKLFSVIQNKLSRHKLCLVFQTLSDLDNKLKYITDVVK
LNAFDQRHLDDIDFDVRLSAFQSITAHIKEMQAVDIDFLIPVMHNCFYTIQLGDMALSDN
ASLCLTSFIHRLAEVNHTEDDYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQTF
PANPEFRDLVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKHLTEKTLVLSSKSLQNY
IMPYATTAIFNEKMLKHENMVTASVEVVGAVCQHLSWSAYLYHLKHFIHVLQTGQISPKL
GVSLLETVLEAFHFDHKTLEKQLVTIENQEATAMDLEPVLEGEEAMELEQSEGEEEVAEE
KKGKNLPEEPAEPEQAAKTSEDAKQVTKPVSFLPRNKEELECLIKHIQDTVTVNILPKLH
RCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKVCT
FLRNRFQEIRDIARNTLTKIMEVLGVQYLLYILKEMQSTLVHGYQLHVLTFTVNLLLKGL
TTRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKVMEARKNKSYDSYEILGKFI
GKGQVTKLILPLKEILESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLISE
NLPLLTEKAKKKVAPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLLH
MSLKRSKVNSSEEHVLEMLDPFVQLLIDCLKSMDVKVVTGALQSLVWILKFPLPSVSTNL
EPLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTILVKNAKSQITSKQLQVLLGFAEE
DIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKYIL
DYPLGDKLKPNLDFMLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLSLCMM
MINDDSAKCKKMAALTCKSLLSKINNEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVE
VEGVMFERRLEAVLNLIEKEINPIKFEDITEEEEEKAADRLLFSFLVLVTKLITECSLIQ
LTKNSNVVSNIWGHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWRERRAGKRKK
TSAELSAATVFLTAELDKKMKELVFAFCHQLQSKFLDLSLGEQVIKNLLFVAKVVYLLAP
ALEEGKEAEGELRCDVEEQEASEDEEEKDISAQGEGEREDTEEKGQPATLLWLMKKLSLM
AKREAAYSPKVPLKRSCIFKFLGAISVDLGKDRIKPYLPTILTPLYRELNSTYAEQDPTL
KNLSQEIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKLKR
HKNKAETRKRKIEFLRPTYKAKRPRSHALKDLAMVE
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagtcctcagcccacaagtcggggaacacgcaccggtttcttaccttttcg
gagcgcttaagcaatgttaatatcgatattattcatcggattgacagaactggaagctac
gctgaggaggttgaaacctacttttttgaaggactacgcaaatggagggaactgaacctc
actcagcattttgtgcaattctacagtgaagtggccaacaaatgccagtccttcaaccag
ctggtctattaccagagtaccattgtgcagagcttgaaaacacatttgcaaattgaaggc
agtcttgcttatcaacccctattagatctagtggtgcagctggctcgagatcttcaggct
gatttctatcctcactttcatgactttttcctggccatcacaaagttactggatacacag
gacacagagctgctggaatgggcttttacctctctttcctatctctacaaatacttgtgg
agattaatggtgaaggacatacacaacatatacagcctgtacagcaccctgctggctcac
cacaaacttcacatcaggaactttgctgctgaaagttttgtctttctaatgagaaaggtt
tctgataaaaatgcaatcttcaatttcatgctccgtgacctgggggagcaccccgagaag
gtggaaggtgtaggacagctactttttgagatgtgcaagggtgttcgaaacatgtttcac
tcttgtgtagagacggctatgaagttaattctgttaaagctggggcctattactgaggaa
gaaattgaactaccatgggtaactgtaggagaagcctttgagcagatgatcagatcagct
gtagtgcatatccataaggagcattttgacattgtcttcaagtgcctggaggagtcactc
ttagacttacagaggaaaataactaaggccaactgctgtatggcttcagagcagatggag
aggattctgcaagcttatctcatcctagtggaatatgcaaatggatccaaaatctcactg
cctgaagacgtctgtcggattttaataaaaatgttacaaacaccagatctctcgtcatct
tgctgcaagaccctgctgaacactatttctgcattcctgctggccgagaatgttttcttg
cctgattctttgaccaaggaagctattgagaaggtatttgcaagtggatttgaatggcgc
tttcttttggacttctctgaagcgatgttcacaatgaagcaatttgagaggcattttctt
ccgtgctttctggagtacatggagcattgcttctctggcacagatgccctcacgaaggat
gaggcgatggcaattctggctaaactcattctggtgaaagcagagcctcctaccattggt
tcaatggcatttgaaaagtatcctctcattttcactgaatcacccctcagctctaataca
agacaacaaacaagtaaaagacaaggaggaaaggcagaagtaccagtgttggatcatgta
ctgtctttaatccatttaccagagaaggaagacatcactgacctttcacagccttgggtt
gccttggttgtactgccacatattagaccaatggacaaagaaaacattctgccccgtgtg
acaagttttatagactctctcttcacagccattgacaaaggaagcctctgcaaaggaagc
ctgtttgtggcctgccaagctgtaagtactcttcttagtttggcggagtcttctgaaata
ctccatttgttacctgtggagcgtgtcaagagcttggtgaccactttcccttcagacccc
tctgccttgctgttggctgatctctattacacgaggttggcattgtgtggctgtcaggaa
cccctttccccggggaatctaatggacttgtttgagaagttgcatcctaatatttccact
ggtgtttccaaggtccggctattgactgttcgaattctaaaccattttgagaatccacct
cctacgcagattgagggtaatggcacaggggagctccagccgatatttgccatattgctc
caagcagaacttgtgccagcaacagtaaatgattacagagaaaaacttctccatttgagg
aaactaagatgtgatgtagtgcagtctgcaataccaagtggatcgttgcaggaggtgcct
cttcggtatttactgggagtgctttatattaacttcagccccctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcttatat
gaacatttggagagggctgccacctatgctgaaatggagctgcaaaatgaactagatgaa
caggaggaaagcattgctgaaacagaaagcgagaagatgccagaaggaggggtggggatt
gtcttcctggagcagctgagggctagaacagattgcagtgagcggctcgaccacacaaac
ttccgttttctactgtggaaagcactggataagtttccagacagagtggagcctagatca
agggaactttccccgctacttttgagatttattagaaacgagtactacccagcagattca
ttagtggctccatctcaggatcttagaaagaaaactagtggtacagtagcagcaaaagaa
atacagggtgaagagttgaatgatgttgctatggaggaggaggaggaggaagaagaaaag
gaagaaggggaaccaattactgtaggactaccaaaaaagaaaacaagaagagctgctgct
aagcaactaatagcccatttacaagttttctctaaattctcaaatcctcgtgcattgtat
ctggagcagaagttgaatgcattatatacccagttactgtcccatcaagaccagaatgta
cagagaatagctcttgactgtataatgacatacaagcatcctcatctactgccatacagg
gagaacttgcaaaggctactggaggacaagagttttaaagaagaaatagtccattttagt
atttctgaagaaactgcagtagtaaaaatggagcatcgaccagatctcatacctgttctt
atgagaattctctatggcagaatgagaaacaaaacagggagcaaaacacagggcaagtct
tcagcgggcactcgcatgtcgatcgttctgcgatttcttgccggctcgttgccagaagag
atacggatgttcttggatctgctctttgaagccgtgaagcaattcagtaatgggtcttgc
cagactgcagtgcttcaaagtatgtcagagctggatttagctaaagtcctgcctcttggg
cgtcagcatagcctcttcaacggtcttgaagttgtgttgaaaaacatgggacatttgatc
catcagtacctgcctgaaattctacagattctgctctgcatgacagctgtggtatcctgc
atcctccagcaaagagagaagatccaacctaggttgattaatccactgaagaatttgagg
cgtcttggactcaagcttgtggcagagtttttttctgattatgagacctacagctttagt
gtggaagagattgatgcagttttccatgcagtggtatggcctcaggtctgcagattggct
tcagagagtcagtattctccaacatttctgctcaaactcattcacacctggagtaagaat
cccaggtatttccccttgctggccaagcagcagccagatcacccagaatgtgatatactg
tcaaatgtgtttgctgtcctgtcagccaagaatctttctgaggccacatccagtcttgtg
atggacatagctgatagccttctcaacagcccagattttgaacccacggagcaggtttcc
agtttgagcgtgactgactgtgttgtcatggtcgctggagatgtaacagaagagaccctc
agcctaggttgccgcttggttctgcctcatgttcctgccatacttcagtacttcagcaaa
acaatgttaaatgtggagaaggtgaaaaagaagaagtatagagctcaagtcagcaaagag
ctgagtatactttccaagatcagcaaatttatacaagaaaagagtcagaattcagtgctt
gtgagccttctcctccctttcctttatcagagtaacatggaacagggtacagagattgac
attctggagacagtgcagaacttgctgaggcattgctcaaaccctacaggctttctcaaa
ccactggcaaagcttttttctgtcatccagaacaaattgtctcgacataagttgtgtttg
gtatttcagactttatctgatttggacaataaattgaagtatattactgatgttgttaag
ctgaatgcctttgatcaacgacacctcgatgatatcgacttcgatgtacgtctgtcagcg
ttccagtcaatcacagcccacatcaaggaaatgcaagcagtggatattgacttcctcatc
cccgttatgcacaactgcttctataccatccagctaggggatatggctcttagtgacaac
gcaagcctttgcttgaccagttttatccaccgactggcagaagtcaaccacacagaagat
gactacaaggagctaatccagcacactctcctggagtctgtgagaagggggctgaagagt
aagactgagagcatccagcaggactacacatcattgctttcctgcctcattcaaacgttc
ccagcaaatcccgaattccgggatttggtccagttgaccaaccgccatgatcccgacatg
gacttctttgagaacatgaaacacatgcagatccacaggagggcacgagctctgaggaaa
ctggctaagcatctcactgaaaaaacccttgtgctgtcttccaaatctctgcagaactac
atcatgccttatgctactactgccatttttaatgaaaaaatgcttaagcatgaaaatatg
gtaacagcctcggttgaagttgttggagctgtctgccaacatctctcatggtcagcgtac
ttgtaccacttaaagcatttcatccatgtcctgcaaacaggacagatcagtccaaagctg
ggagtcagcttgttagagacagtgctggaagcctttcattttgaccacaaaacacttgaa
aagcagcttgtgaccattgagaaccaagaagctactgccatggaccttgagccagtgctg
gagggtgaagaagccatggagctcgagcagagtgaaggggaagaggaggtggctgaggaa
aagaaagggaagaatctccctgaggagccggcagaacctgagcaagcagctaagacatct
gaagatgctaaacaagtgaccaaacctgtttctttcttaccccgaaataaagaggagctg
gagtgtctgatcaaacacattcaagatacagttacagtcaacatcttgcctaaattgcac
agatgtattgttgcaaaggttaaaagagacgaggaacacaagcttgtgaaatccaacgtt
gtgaacgatgacgaggtagttcgtgttccgttagcttttgcaatggtcaggatgatgcag
tgtcttccccaagaagtgatggaagccaacctgccaagcatcctgctgaaagtctgcaca
tttctgaggaacagatttcaggaaatccgggacattgcccgtaacaccctcactaaaatc
atggaagtgttgggagtgcagtaccttctgtacattttaaaagagatgcagtccactctc
gtccatgggtaccagctccatgtgctgactttcactgtgaacctgttactgaagggcctt
actaccaggctcagtgctggtgatttggacccctgcttagatatcctgattgagattttc
aaccaagagttatttgggaatgtagctgaagagaaggaagtgaagggaattgtctccaag
gtcatggaagcgcgcaagaacaagagttacgattcctatgaaattcttggaaagttcata
ggaaagggccaggtgacaaaacttattctgccactgaaagagattctggagagcaccaca
agcttgaagatagtccggaaggtgcatgaggcgctgcgtcacatcatggcagggctgatc
ttcaattcagacatgaacgcagaatcccttctcctcctcagtcatggtctcatcagtgaa
aacttgcctctgctcactgagaaggccaaaaaaaaagttgcacctcctccagatcctcgc
ctgcaaccagagagctgcctgctgctccaacccactcccacgagaggagggcagaaagca
cgtgtcagcagtaggactaacacgtatatcttggttgattcaggacttcggctgctgcat
atgagcctgaagaggtccaaagtaaattcttctgaggagcatgttttggaaatgttagac
ccttttgttcagctgcttatagactgcctgaaatctatggatgtcaaggtggtaaccggt
gctctgcagtccttggtgtggattttaaagttccctttgccttctgtcagtacaaatctg
gagccactgatcaagcagcttttcctcttgctgaaagaatttgccaagacaggaatagcc
aaaggccagaatttccacctggttgtgagctgtttcaaatgtgtaacaatacttgtgaag
aacgcaaagagtcagataacaagcaaacaactccaagtgttgcttggctttgctgaagaa
gacatttatgattcatcacgccaagccactgcctttggccttctcaaggctattttatcc
aggaagctgattgtccctgaaattgatgatgtgctgcagaaggttgcccagctggccatc
acgggtcagagtgagccggtgcgagtccagtgcaggcagatttacttaaaatatattctg
gactacccccttggtgataagctgaaacccaatttggatttcatgctcgcacaactggag
tacgagtatgaaactggaagggaatctgcactggagatgattgcgtacctccttgacatg
ttcccacaggatctcctccacaaatactgcgggctgttttttctctctctttgtatgatg
atgataaatgatgactctgccaaatgcaaaaagatggcggctttgacgtgtaaatctctc
ctcagtaagataaacaatgaaaaacaagatctgatgttttcgctggtcacagagtggttt
cacagcaagaagagctcacaccgaaggttggctgcccaggcatgcggtttgtttgttgaa
gtggagggagtaatgtttgaacggaggcttgaagctgtcctcaacttgattgaaaaagaa
atcaacccaattaaatttgaagatataactgaagaggaggaggagaaggctgcagatagg
ctgctattcagcttccttgtgctggtaacaaagctaatcacagagtgcagcttgattcag
ttaacgaagaacagtaatgttgtgagcaatatctggggtcatgttcagtctcacctgtgg
tatcctcacagctgggtctggctgacagctactgagatctttggcttgttgtttgcatct
tacaagccagaagatcttgtcaacaagtggagggaaagaagggcagggaagaggaaaaag
acgtcagcagagctgtctgcagccacagtcttcttgactgctgaactggacaaaaagatg
aaggaactcgtgtttgcattctgccatcagctgcagtccaagttcctggacctgtctctg
ggagagcaggttataaagaatttgctttttgtggcaaaagttgtttacttgctagcccct
gccttagaagaaggtaaagaggctgaaggagaactcagatgtgacgtggaagagcaggag
gcctcagaagatgaggaagagaaagacatttctgctcaaggagagggagaaagggaggac
acagaagagaaaggccagccagccacattgctatggttaatgaagaagctctctctcatg
gcaaagcgagaagcagcatattcccctaaggtccctttaaagagaagctgcatctttaag
ttcctgggagcaatctcagtggacctggggaaagacaggatcaagccgtaccttccaaca
attctcacccctctgtacagggagctgaacagcacctatgcagagcaagatccaacactg
aagaacctttcccaagaaatcatagaactgctcaagaagttagtgggactggaggctttt
tcgcttgccttttcttctgtgcagaaacaggccaatcagaaaagagcgatgaggaaaaag
cagagggctttgcagactgtagcaaaccccgacattgctgcaaggaggaagctgaagaga
cataagaataaagcagaaaccaggaagagaaaaatagaattcctgcgccctacctacaag
gccaagagacctcgaagtcatgcactgaaagatttagcaatggtggaatga
DBGET
integrated database retrieval system
