Calonectris borealis (Cory's shearwater): 142083096
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Entry
142083096 CDS
T11211
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04137
Mitophagy - animal
cbor04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142083096 (AMBRA1)
04137 Mitophagy - animal
142083096 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142083096 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
cbor03029
]
142083096 (AMBRA1)
Membrane trafficking [BR:
cbor04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
142083096 (AMBRA1)
Mitochondrial biogenesis [BR:
cbor03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
142083096 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
142083096
NCBI-ProteinID:
XP_075008301
LinkDB
All DBs
Position
5:complement(44730081..44865132)
Genome browser
AA seq
1301 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTEMPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNSVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SVAQEEQGILNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGPLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEADSGGSAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEML
NNNIEPDRPGPSHQQTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYTPG
QVQSTFEGVPPNTSQVQPAERTEGRAPASSRLQLGSSSTPQEERTVGVVFNQETGHWERV
YSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDP
ARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSSSTSENSSPSVEGNDLEFE
DFERDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVN
RVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCD
ISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYV
MVGLASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARW
LPEPGLGLAYGTNKGDLVICRPEALNSGVEYHWDQLNENVFAVHSSSRSTERPGTSRATW
RTDRDMGLMNAIGLQPRNPPTSVTSQGTQTLAPQLQNAETQTEREVQEQESASAGTGEGE
GPEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGA
ESAGVEGTSAQQSTSQQLAAELEGRILSESMQLSEHGLSPRTASSGSEGQSAGDLDLPEQ
AQSSMDTEGPIEYSDLTNNNHLPDSTNFYSNDSTSGESRNR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccggagaagaatgctgtccgcatcctgtggggtagggaacggggtacc
caagccttgggcgctcagcggctcctgcaggagttggtggaggataaaactcgatggatg
aaatgggagggcaagaaagttgagttaccagacagtccacgctccaccttcttgctggcg
tttagtccagacaggaccctaatggcttccacacatgtgaaccacaacatctacatcaca
gaggtgaaaacgggcaagtgcgttcattccttggttgggcatcgccgcactccctggtgt
gtcaccttccatcccaccatcccgggcctcattgcttcaggatgcctagatggggaggtt
agaatttgggatttacacggtggaagcgagagctggttcacagatagcaacaatgccatt
gcgtcgcttgcttttcatcctacggctcagctcttgctgattgcaactgccaatgagata
catttctgggactggagtcgtcgggagccttttgcagtggtgaaaacagccagcgaaatg
gagcgggtcaggctggtacggtttgatcccttgggacattacttgctcacagcaattgtt
aacccttctaaccagcagagcgatgaggaagtggaaatctccgtggacagcacagagatg
ccgcattatcgccagcgcgctatccttccttctcagcctgtgaggcgcacgcctctcctc
cacaacttcctgcatatgttgtcctcccgctcctctggcatacaggtgggagagcaaaac
agtgttcaagactctgctaccccatcccctccaccaccgccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtctataacaggctccgggagcgtgtcagctat
cccacagcagagtgctgccagcacctggggatgttgtgcctttgcagccgatgctctagt
gcaagacttccttcttctctcttcccacaccaggaaaacgcaccctccacgtcttctggg
gccactggcacttccttctcctctgtgcagacagagccttaccagcccccagagcaggca
tccgtagcgcaggaggagcaggggatacttaacaggccctctgctttcagcacggttcag
agcagcactgctggcaacaccctgcgcaaccttagcctgggccccacgcggcggtccctc
agcgggcccttggcgggccaccagtcccggtaccaacagtctgcgagagagatggcttcg
ggcttaggcgggtctgactggtccaggacggtgctgaacatgagctctcgctcagagctg
gaagccatgcctccccctaggaccagtgcctcctccgtgagcttgctgtcggtgctgagg
cagcaggagggaggttcccaggcgtcggtctatacctctgcgacagaagggagaggcttt
ctggccccaggggctgaggcggacagtggtggtagcgctggcccgagcaatccggccagc
atccgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccggcttcag
gagttagatcaggggattggtggggagcccagccagtcgcaacaggctcaagaaatgctc
aacaacaacattgagcctgatcggccgggtccctcccatcagcagactccacacagcagt
gaaaacaattccaatttgtcccggggtcacctgaaccgctgtcgcgcttgtcataacctg
ctgacctttaacaatgacacgctgcgctgggaaagaagcacgcctagctacacaccaggg
caggtccaaagcacgtttgagggtgtgcctccaaataccagccaggtgcagcctgcagag
agaaccgagggcagagctcctgcctctagcaggctgcagctgggcagctcttccaccccg
caggaggagaggaccgtgggagtggtctttaaccaggagacggggcactgggaaagagtt
tacagccagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaa
atgcctgaggaaagctcagaggaggattcactgaggaggaggttgttggagtcttccctc
atttcattatctcgctacgatggagcagggtcccgggaacatccgatctacccagatcca
gccaggttgtctcctgctgcatattatgctcagaggatgatccagtatctttcccggagg
gacagtattcgacaacgctccatgcgataccaacaaaaccgtctccgctcttcctcctcc
tcttcttccacttcagagaactcaagcccatctgtcgagggaaacgatctggaattcgaa
gattttgaaagggacaatggagaccgatccaggcaccgagctccccggaatgcccgcatg
tctgcaccatcgctggggcgctttgtcccgagacgcttcttgctgccagagtacttgcct
tatgctgggattttccatgaacggggacagcctggcttggccacccattcctctgtcaac
agggttttggcaggtgctgtgattggggatggacagtcagctgtggccagcaacattgcc
aacaccacctaccggctccagtggtgggacttcactaaatttgatctgcctgaaatcagc
aatgcctctgtgaacgtgcttgttcaaaactgcaagatttacaatgatgctagctgcgat
atctctgccgatgggcagctgctggcagccttcattccgagcagtcaaagaggcttccct
gatgagggaatactggctgtgtattctctggcaccccacaacttgggcgagatgctttac
acaaagcgatttggccctaatgccatttctgtcagcctgtctccaatgggcagatacgtc
atggtgggactggcttcccgacgtatcctgttgcacccttccacagaacacatggttgct
caagtcttcaggctgcaacagccccacggtggagaaacctctatgaggagagttttcaac
gttctgtacccgatgcctgccgaccagagaagacatgtcagcataaactccgctcgctgg
ctgcctgagccaggcctgggactggcatacggcaccaacaaaggggacctggtgatttgc
cgaccagaggccttaaactctggagttgagtaccattgggaccagctgaatgagaatgtc
ttcgctgtgcattccagcagcaggagcactgagcggcctggaaccagcagagccacatgg
aggacagacagggacatgggcctgatgaatgccataggcctgcaaccccgaaaccccccc
acttctgtgacttcgcagggtacccagaccttggcgcctcagctgcagaatgccgagact
cagacagagagggaggtacaggagcaggaatccgcctctgcagggactggggaaggtgaa
ggtccagaatatggggccagtggggaggatgccctgagtaggatccaaaggctgatggca
gaaggtggcatgactgccgtggtccagcgggagcagagcaccaccatggcgtccatgggt
ggctttggcaacaacatcattgtgagccaccggatccaccgcagctctcagactggtgca
gagtctgctggagttgagggcacatcggcacagcagtccacctcacagcagttggcagct
gagctggagggacggatcctttcagagtctatgcagctgtcagagcatggcctgagcccg
cggacagcctctagcgggagtgaaggacaaagcgctggtgacctggacctgccagagcag
gcccagtcctccatggacactgagggaccaattgaatacagtgacctaactaataataac
catcttcctgacagtaccaacttctatagtaatgacagcaccagtggggagtcgcggaac
aggtag
DBGET
integrated database retrieval system
