Calonectris borealis (Cory's shearwater): 142083430
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Entry
142083430 CDS
T11211
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04145
Phagosome
cbor04148
Efferocytosis
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142083430 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142083430 (ITGB5)
04148 Efferocytosis
142083430 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142083430 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142083430 (ITGB5)
04810 Regulation of actin cytoskeleton
142083430 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142083430 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142083430 (ITGB5)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
142083430 (ITGB5)
Cell adhesion molecules [BR:
cbor04515
]
Integrins
Integrin beta subunits
142083430 (ITGB5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
142083430
NCBI-ProteinID:
XP_075008921
LinkDB
All DBs
Position
6:11611782..11676929
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AA seq
811 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEEFGSTKSITSRCDFLQNLIANGCAGAIENPSSSINVVKNVPLSSKGSGQTHLDVTQ
ITPQKVALNLRPGDRTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTDKVD
RFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYVLYKNF
TALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVAVEARSCPAEDTSHAFTIKPAGFRDTLEVAVTYNCLCGCTGH
AAPASGKCSGNGTYACGLCECDAGYLGAKCECEEGASGDMHHAMCREAEGKPLCSGRGEC
SCNQCLCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCS
TETDSCVSSDGQMCSGRGTCVCGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYLELPSGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLGLWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTID
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccgctcctc
ctcctccgcctcctcctcctggccgccccgctgcagcccggcagaggcctcaatctgtgc
accagcggaagcgccacgtcctgcgaagagtgtctcctcatccatcccaagtgtgcctgg
tgctccaaggaggagttcggcagtacgaagtccatcacgtcgcggtgtgacttcctgcag
aacctgattgcaaatggttgtgccggagccatcgaaaaccccagcagcagcatcaacgtg
gtgaagaacgtccctttgagcagcaagggctctggccagacccacctggatgtcacgcag
atcacgcctcagaaggtagccttgaatcttcgtcctggtgaccggacctccttccgagtt
caggttcggcaagtggaggactatcccgtggacctctactacctgatggatctctccctg
tccatgaacgacgacctagataatattcgcaatctggggacgaagctggctgaagagatg
cgaaagctcactagcaatttccggctggggtttggatctttcgtggacaaaaacatttct
cctttctcctacacggcaccaagataccaaaacaatccctgcattggttacaagctgttc
cccagctgcgtcccatcctttggcttccgccacctcttgtcgctaacggataaagtcgac
cgtttcaatgaagaagttcagaaacagaaggtttcccgcaatcgagatgctccagagggc
ggtttcgatgcgattttgcaggctgccgtgtgcaaggagaagatcggctggcgtaaggag
gcatctcacctgctggtcttcacgacggatgacgtgccccacatagccctggatgggaag
ctgggggggctggtgcagccccacgacggccagtgccacctgaatgaagccaatgagtac
agcgcgtccagccagctggattatccttccctggcgcttcttggggagaaactggctgaa
aacaacatccacctgattttcgccgttacaaaaagtcattacgtcctgtacaagaacttt
accgccttgattcctgggacaacagtggagattttgcacaaagactccaagaatatcatc
gagctgatcgtcaaggcctacaacagtattcggtccaaggtggagctcacagtctgggac
agccctgaggacattggcttgaccttcactgccacgtgccaggatgggttgtcctatccc
gggctcaggaagtgcggggatctcaaaataggagatacggtttccttcgaggtggccgtg
gaggcacggagctgtcccgccgaggacacctcccacgccttcaccatcaagcccgccggc
tttcgggacacgctggaggtggcggtgacctacaactgcctctgcgggtgcaccggccat
gctgcgccggccagcggcaagtgcagcggcaacgggacctacgcctgcgggctgtgcgag
tgcgacgccggctacctgggggccaagtgcgagtgcgaggagggtgccagcggggacatg
caccacgccatgtgccgggaggcggagggcaaacccctctgcagcgggagaggggagtgc
agctgcaaccagtgcctctgctacgagagcgagtttggaaacatatacgggcccttctgc
gagtgcgacgacttctcctgcgccaggtacaagggagtcctctgctcaggccacggagag
tgtcactgcggggagtgcaagtgccacgccggttacatcggggacaactgcaactgctcc
accgagacggacagctgtgtttctagcgacgggcagatgtgcagcggcaggggcacctgc
gtctgtgggaagtgtcagtgcaccgagccgggggcttttggagagacgtgtgagaagtgt
cccacctgcccaggcgtctgtagcaccaaaagggactgcattgaatgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgcaaggacgagatcatcacc
actgtggatgttctcgaaacagatgacccgaacgcgatcctctgcgcctacccggtgaac
aactgcgtcatgaaattcacctacttggagcttcccagtgggaaatccaacctcaccgtc
ctcaaagagccagcgtgcagctcagcccccagcgccgtgacgatcgtgctggcggtgatc
ggcagcgtggtgctgatcggcatcatcctgctggggctctggaagctgctcgtcaccatt
catgacagacgggagtttgaccgattccagagtgaacgctcccgggccagatatgaaatg
gcatccaatcctctctaccgaaagcctatttccacgcataatgtagagttcacattcaac
aagctcaacaagtcttacaacggtacgattgactga
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