Calonectris borealis (Cory's shearwater): 142083458
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Entry
142083458 CDS
T11211
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142083458 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142083458 (CLASP1)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
142083458 (CLASP1)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
142083458 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Sec7-like_HUS
Adaptin_N
RTP1_C1
HEAT_DAAF5
PDS5
ParcG
MMS19_N
MMS19_C
XRN_M
KH_DEAH11_1st
TAN
TPR_20
Motif
Other DBs
NCBI-GeneID:
142083458
NCBI-ProteinID:
XP_075008980
LinkDB
All DBs
Position
6:13621217..13810526
Genome browser
AA seq
1465 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDILSALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSGDKI
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAALGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLGRIRTRRQSSGSATSVTSTPADT
RGRSRAKVVSQSQPGSRSSSPGKLLGSAYGGLSGGTSRVQPVPSSSEKRSKIPRSQGCSR
ETSPNRIGLDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRY
EPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGL
IGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKV
AILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTSPLTSPTN
CSHGGLSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIV
SRDGGLAVPTSDVRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGPRGREYNPYPYADTIN
TYDKTALKEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITR
EDNLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTL
EAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERI
SKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKL
LNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcttagcgcaggtgctgcaaaaggatgttggaaagaga
cttcaggttggccaggaattgatagattacttctcagataaacagaagtcagctgatctt
gaacatgatcagactatgctggataaaatggttgatggactggccacttcttgggtaaat
tccagcaattataaggtggttctcctggggattgacatcctttccgcactagtgtcccgc
ttgcaagatcgcttcaaggcccagattggcacagtgctgccaagtttacttgatagactg
ggagactctaaggactcggtgagggagcaggatcagaccttgctgctaaaaatcatggaa
caagctgctaaccctcagtatgtgtgggacaggatgctaggaggattcaaacacaagaat
ttccggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactgagtaagatagtgccacatatatgtaacttacttggagatccaaac
agccaggttcgcgatgcagcaataaacagccttgtggaaatttacagacatgttggtgaa
cgcgtaagagctgatctcagtaaaaaaggattaccccagtctcggttgaatgtaattttt
acaaaattcgatgaggtccaaaaatctggaaacatgatccagagttcaggtgataaaatt
tttgatgatgaagactccgtggatgggaacaggccttcctcagctagctcctctacatct
tcaaaggcccctgcaaactcacgcagagttgggatggggacgacccgcagacttgggtct
gcagctctgggctccaagtcttcaacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacggttcagatttattctagccgggatctt
gaggaatccataaacaaaataagagagatactatcagatgataagcacgactgggaacag
agagtttccgcgttgaaaaagatacgctccttacttttggctggagctgcagaatatgat
aacttcttccaacacttaagacttttggatggagcatttaaattatccgctaaagacctg
cggtctcaagtagtgcgagaggcttgtatcacattgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccatcatgccaacaatttttaatctaattccgaac
agtgccaaagtcatggccacttctggtgtcgtagcagttagattaatcattcgacatacg
cacatccctcgattaatacccatcataaccagtaattgtacctccaagtctgttgcagtt
agaaggcgctgttttgaatttttagacttgctgttgcaggagtggcaaacacactcccta
gaaagacacatatcagtgttagctgaaacgataaagaagggaattcatgatgcagactct
gaagccaggatagaggcaagaaagtgttactggggtttccacagtcacttcagccgagag
gcagagcatttgtaccacaccttggagtcttcctaccagaaggccctgcagtcgcatttg
aagaactctgacagcatcgtgtccttgccccagtcggatcgctcctcctccagctcccag
gagagtctcaaccgtccattgtctgccaaaagaagtcctactggaagtactacatctaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgtcgatgtgaatgcagcagctagtgccaagtcaaaagtgacgtcttctggagcatcc
acccccttcagttctgctgcagccttacccccaggctcatacgcatcactaggtcggatt
cgtacaaggagacagagctctggcagtgccacaagcgtcacctcaacgcctgccgatacc
cgaggccgcagccgggctaaagtagtttcccagtcccagcctggtagccggtctagttct
ccgggtaagctgttaggaagcgcctatggtggcctgagcggtggaacgtccagagtccag
ccagtgccatcatcttcagagaagcgcagcaagatccctcggagccaggggtgcagtcga
gagacaagtcccaacagaataggactagaccggtttggactcggacagccaggcaggatg
cctgcttctgtgaatgccatgcgagtcctgagcacaagcacagatctggaggctgctgtg
gccgatgcactgctgttaggagactccaggagcaagaaaaagccagtgagaagaagatat
gaaccctacgggatgtactccgatgacgatgctaacagtgatgcatcaagtgcttgttcg
gagcgctcctatggttccaggaacgggggcattccacactacctacggcagactgaagat
gtggccgaggtcctgaaccactgtgccagctccaactggtctgaaagaaaagaggggctc
ataggtcttcagaacttactgaaaagccagcggacactgagccgagtcgagttaaaaagg
ctgtgtgaaatatttactcgcatgtttgctgaccctcacagcaagagagtcttcagcatg
tttctggaaaccctggttgatttcatcatcattcataaagatgacttgcaggattggctt
tttgttctcctgacccagttgctaaagaaaatgggagcagatttgctggggtctgtgcag
gctaaagttcaaaaagctctggatgtcaccagggattcttttccattcgatcaacaattt
aacattttgatgagatttattgtagatcagacccaaacaccaaacctgaaggtgaaagtt
gctatcctgaagtatattgagtccttggcaagacagatggatccaacagactttgtgaac
tccagtgagacaagacttgctgtatctagaattataacttggacaacggaaccaaagagc
tcagatgtgagaaaggcagcacaaatagtcctgatttctctctttgaattgaacactccc
gagtttactatgttacttggtgccttgccaaaaacattccaggatggtgctaccaagctt
ctgcacaaccacctcaagaactccagtaacaccagtgtgggttcccccagcaataccctt
ggtcggactccttcccggcactccagcagcagaaccagccccttaacttcacctaccaac
tgttcccatggtggactgtctccaagtatgctggattatgacacggagaacctaaattct
gatgaaatctacagctctcttcgtggagtcacagaagcgattgaaaaatttagtttccgt
agtcaagaggacctgaatgagcccatcaaacgtgatggaaagaaggactgtgacattgtg
tctcgagatggtggcctcgctgtgcctaccagtgatgtccgtggaagcagtgacattgtg
gaaggtggaaggatggctttagataacaaaacctccctacttaacacccagcctccccgc
gccttttcagggccacgtggtcgagaatataacccctatccttatgccgacacaattaac
acttatgacaaaactgccctgaaggaagcagtgttcgatgatgacatggatcagcttcgg
gatgaagtacccattgaccattcagacttggtggccgatcttctgaaagagctctccaac
cacaacgagcgggtggaggagcggaaaggagctctcctggagctgctaaagatcacaagg
gaagacaatctcggagtttgggaggaacatttcaaaaccattctgctcttgctgctggaa
acgcttggagacaaagatcattcaataagagccctggcgctgcgagtcctgagagagatc
ttacggaaccagccggcaaggtttaagaactatgcggagttgaccatcatgaaaacgctg
gaagcacataaggattcccacaaggaggtcgtcagagctgctgaagaagctgcttccacc
ctggcgagttccatccaccccgagcaatgcatcaaggtgctttgccccatcattcagact
gcagattatccaattaacttagctgctatcaaaatgcagacgaaagtcatcgagaggatt
tccaaggaatcgttgcatcagctcctccccgatatcattcctgggttgttacagggttat
gataatacggagagcagcgtccgtaaagctagtgtattttgcctagtggcaatttattca
gtaattggagaagaactgaaacctcatctcgcacaactcacaggaagcaagatgaagcta
ctaaacttgtacataaagagggcccagaccaccaacagcaacagcagttcctcttcagat
gtttcaacgcacagttaa
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