Calonectris borealis (Cory's shearwater): 142083643
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Entry
142083643 CDS
T11211
Symbol
ITGA4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04514
Cell adhesion molecule (CAM) interaction
cbor04517
IgSF CAM signaling
cbor04518
Integrin signaling
cbor04672
Intestinal immune network for IgA production
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142083643 (ITGA4)
04514 Cell adhesion molecule (CAM) interaction
142083643 (ITGA4)
04517 IgSF CAM signaling
142083643 (ITGA4)
04518 Integrin signaling
142083643 (ITGA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142083643 (ITGA4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142083643 (ITGA4)
04810 Regulation of actin cytoskeleton
142083643 (ITGA4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
142083643 (ITGA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142083643 (ITGA4)
04515 Cell adhesion molecules [BR:
cbor04515
]
142083643 (ITGA4)
04090 CD molecules [BR:
cbor04090
]
142083643 (ITGA4)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142083643 (ITGA4)
Exosomal proteins of other cancer cells
142083643 (ITGA4)
Cell adhesion molecules [BR:
cbor04515
]
Integrins
Integrin alpha subunits
142083643 (ITGA4)
CD molecules [BR:
cbor04090
]
Proteins
142083643 (ITGA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
142083643
NCBI-ProteinID:
XP_075009474
LinkDB
All DBs
Position
6:27621118..27658753
Genome browser
AA seq
1024 aa
AA seq
DB search
MRSCGRARGAAGWAAPLLLLWQCLPTARPYNLDTQHPLLFRGGNGTLFGYSVLLHRHGEE
RWLVAGAPRASWPANSSVANPGAIFRCRIGRNPRGRCEQLQLGNPNGERCGKTCLEERDN
QWLGVSLSRQPKENGSIVACGHRWKNVFYIKNEHKLPYGICFAVSSDFRTELSRRICPCY
IDHVRKFGENHGSCQAGMSSFYIEDLIIMGAPGSFYWTGSVFVYNTTANTIHAYTDSNNQ
VKFGSYLGYSVGAGHFLTSASTEVIGGAPQQEQTGKAYIFSIEKQLNILFELRGKKLGSY
FGAAVCAVDLNSDGLSDLLVGAPMQSTIREEGRVYVYINSGSEAKMVELNIELSGSDSYA
ARFGESIANLGDIDNDGFEDVAIGAPQEDNLKGVIYIYNGREDGITPSFSQRIEGHQVSN
SLNMFGQSIASGIDADNNGYQDVAVGAFLSDSAVVLRTKPVIIVEASLKHSNSINRTNLN
CMENDQPAICMNLKICFTYTGREVPGYIVLLYNLSVDVNRKADTQARFYFSSNGTSDTIS
GNVKIYSKNIACKDHPAFMRKDVRDILTPVHVEASYHLGHHILQKRNAQEFSPLQPVLQR
RKEKDVIKSKFVFARFCSQENCSADLRVSGKVAFPKPHDKKTYLAVGSMKTLLLNVSLLN
VGDDAYETVLHIQIPKGLYFIRVLELEEKQIHCDILDKEIHAVKLECSVGYLYVDQKSKL
DFSFLLDASSFTRAEDDLNIIINATCKNEDGNMLLDNTLTLVVPLKYEIELNTHGFVSPA
SFVYGTNEKDSPVTCMKENINFTFHVISAGPSVAPNTNLEITIPNAFPPNDFKLFNTLDI
KTTVGQCSYNKYPRNCSAAEKNENILKDVVTFFSKPAKRQMYCMKNDSLCLQIYCKLGNM
ESGKEATVQLHLEATPSLLEMDDASALKFEVRATASPEKNAKVIELHKDKQVAYVYLEGV
HHQKPKYRVTVLIIGIGLIVGVTLFLLLSFILWKIGFFKRQYKPVPQDKNRRDSWSFTSG
NKDD
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcggagctgcgggagggcgaggggggctgcgggctgggccgccccgctgctcctgctg
tggcagtgcctgccgacggcgcggccctacaacctggacacccagcacccgctgctcttc
cgggggggcaacgggaccctcttcgggtactcggttctcctgcaccgccacggcgaggag
agatggctcgtggcaggcgccccccgggccagctggcccgccaacagctcggtggccaac
cccggagccattttccggtgccggatcgggaggaacccccgcgggcggtgcgagcagctc
cagctgggcaaccccaatggagagcgctgtgggaagacttgtttggaagagcgtgataat
cagtggctgggtgtcagcttatcgaggcagccaaaagaaaatggatctatcgttgcttgt
ggacatagatggaaaaatgtcttttacataaaaaatgaacacaaactcccatacggtatt
tgttttgctgtctcttctgattttcgaactgaactgagcagaagaatatgcccatgctat
atagatcatgtgcgaaagtttggagaaaaccatgggtcatgccaggctggaatgtctagt
ttttacattgaggacttaattataatgggagcccctggatcattttattggactggttct
gtttttgtatacaatacaactgcaaatacaatccatgcttatacagattcaaataaccaa
gtgaaatttggcagttatctaggatactctgttggagctgggcattttctgacatcagcc
agtacagaagtaattggaggggctccccaacaggaacagactggtaaagcatacattttt
agcattgagaaacaactaaatattctatttgaactaaggggtaaaaagcttggttcttac
tttggagctgcagtttgtgctgtggacctgaattcagatggcctctcagacttgctagtt
ggtgctccaatgcaaagtaccatcagagaagaaggaagagtttatgtctatatcaattca
ggttctgaggcaaagatggtggaactgaacattgagctcagcgggagtgactcatatgca
gccaggtttggagagtccatagccaatctaggagacattgataatgatggttttgaagat
gtagcaattggggctccacaagaagataatctaaaaggggttatttatatatacaatggc
agggaagatggaataacgccatcattttcacagagaatagaaggacatcaagtcagtaat
tctttaaacatgtttggacaatccatagcaagtggcattgatgcagataacaatggttat
caagatgtagcagttggtgcatttctctctgattctgctgtggtgctgagaacaaaacca
gtgataattgttgaagcttctttaaaacattctaattcaataaatcgaactaacttaaac
tgcatggaaaatgaccagcctgccatctgtatgaatttgaagatatgctttacctataca
ggacgagaggtacctggttatattgtactgctttataatctgagtgttgatgtgaacaga
aaagcggatacacaagcaagattttatttttcctccaatggaacatctgatacaatctca
ggaaatgtaaagatttacagcaagaacattgcctgcaaagatcatccagcatttatgagg
aaagatgtaagggatatcttgactcctgtacatgttgaagcaagttatcatctggggcat
catattctacagaaaagaaatgctcaagaattttcaccgcttcaacctgttcttcaacgg
aggaaagaaaaagatgttataaaaagcaagtttgttttcgcaagattttgctcccaagaa
aattgttctgctgacttgagagtttctggaaaagttgcttttccaaagcctcatgataag
aaaacatatctcgctgttggaagtatgaagactttattgttgaacgtttctctgcttaat
gtcggagatgacgcatatgaaactgtcctccacattcaaatccctaaaggtctttatttc
atccgagttttagaattggaagaaaaacagatacattgtgacatattagataaagaaatt
catgcagtgaaacttgagtgcagcgttggttatttatatgtagatcaaaagtcaaagctg
gattttagtttcctcttggatgcaagctcgtttaccagagcagaagatgacctcaacatc
atcattaatgctacctgtaaaaatgaagatgggaacatgttgctggataacacgctaact
ttagttgtacctctaaaatacgagattgagttaaacactcatggatttgtatcaccagct
tcatttgtttatggaacaaatgagaaagattcaccagttacgtgtatgaaggagaatatc
aacttcacttttcatgttatcagtgcaggaccaagcgtggctccaaatacaaacttagag
ataacgatacctaatgcttttccacccaatgacttcaaattattcaacacattggatatc
aagacaacagttggacagtgctcttataataaataccccagaaactgtagtgcagcagaa
aaaaatgaaaacatattaaaggatgttgtcactttcttttcaaagcctgctaagagacaa
atgtactgcatgaaaaatgacagcctttgcttacaaatatattgcaagcttggaaacatg
gaaagtggaaaagaagcaaccgttcagttgcatctggaggctactccttcacttttagaa
atggatgatgcatcagcattgaagtttgaagtaagagcaacagcctccccagaaaaaaat
gcaaaagttattgaactacacaaggacaagcaagttgcatatgtctatttggaaggagtg
caccaccagaagccaaaataccgtgttactgtgctaattattggaataggcttaatagtt
ggtgttaccttgtttttgcttctttcatttatattatggaagattggctttttcaaaagg
caatacaagccagtccctcaagacaagaacagaagagacagctggagttttacaagtggg
aacaaagatgactaa
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