Calonectris borealis (Cory's shearwater): 142083719
Help
Entry
142083719 CDS
T11211
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142083719 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142083719 (HSPD1)
03110 Chaperones and folding catalysts [BR:
cbor03110
]
142083719 (HSPD1)
03029 Mitochondrial biogenesis [BR:
cbor03029
]
142083719 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142083719 (HSPD1)
Enzymes [BR:
cbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142083719 (HSPD1)
Messenger RNA biogenesis [BR:
cbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142083719 (HSPD1)
Chaperones and folding catalysts [BR:
cbor03110
]
Heat shock proteins
HSP60 / Chaperonin
142083719 (HSPD1)
Mitochondrial biogenesis [BR:
cbor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142083719 (HSPD1)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142083719 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
142083719 (HSPD1)
Exosomal proteins of breast cancer cells
142083719 (HSPD1)
Exosomal proteins of colorectal cancer cells
142083719 (HSPD1)
Exosomal proteins of bladder cancer cells
142083719 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
142083719
NCBI-ProteinID:
XP_075009695
LinkDB
All DBs
Position
6:32404156..32414316
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLSTVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIELLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALAPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtctatctacagtactccgtcagataaggccagtgtccagagcactcgccccc
catctaacacgagcgtatgcaaaagatgtcaagtttggagcagatgctagagctcttatg
cttcaaggagtagatcttctagcagatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggaagtcccaaagtgacaaaagacggtgtgacagta
gcaaaggcaattgacttaaaagacaaatacaaaaatattggagccaggttagttcaagat
gttgccaacaatacaaacgaagaagcaggagatggtaccactactgcaacggtacttgca
cgtgctattgccaaggaaggctttgagaagatcagcaaaggagctaatccagtagaaatc
aggaggggggtgatgcttgcagttgatgctgtcatagctgaactgaagaagctgtctaaa
cctgttacaactccagaagaaattgcacaggttgccacgatatcagcaaatggagatcag
gaaatcggcaatataatctctgatgcgatgaaaaaagttggacgaaagggtgtaatcact
gtcaaggatggaaaaactctaaacgatgaattggaaatcattgagggtatgaaatttgac
agaggctacatctctccatattttattaatacaactaaagggcagaaatgtgagttccag
gacgcttatgttttaatcagtgaaaagaaaatttctagtgtacagtccatagttccagct
cttgaaattgccaatgctcaccgcaaacctttggtcattattgctgaagatgttgatgga
gaagccctcagcactctagtcttgaacagactgaaggttggtcttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggatatggcaattgctact
ggcggtgctgtgtttggagaagagggcctgaccctaaatgtggaagatattcagcctcac
gactttggtaaagttggagaggtcattgtgacaaaagatgacaccatgcttctaaagggg
aagggtgaaaaagctcaaattgaaaaacgtattcaagaaattattgaactgctagaagtt
accacaagtgactatgaaaaagagaaactgaatgagcgattggccaaactctctgatgga
gtagcagtattgaaggtgggtggcacaagcgacgtggaggtgaatgagaagaaggacaga
gttactgatgcgctgaacgccacccgtgctgctgtagaggaaggcatcgttccaggtggt
ggctgtgcgttgcttcgctgcattccagcattagatgctttagctccagccaatgaagat
cagaaaattggcattgaaataataaagagaacactgaaaatcccagcaatgactattgca
aagaatgcaggcgttgaaggatcgttaatagttgaaaaaatcctgcagagcccatcagaa
gttggctatgatgcaatgctcggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacgaaggttgtgagaactgctctgatggacgctgcaggcgttgcgtctctcttgtca
acggcagaagcagtggtgactgaaattcctaaagaagaaaaagagccggcaatgggagga
atgggtgggatgggcggaggaatggggggcggcatgttctga
DBGET
integrated database retrieval system
