Calonectris borealis (Cory's shearwater): 142084213
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Entry
142084213 CDS
T11211
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142084213 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
142084213 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142084213 (NFKB2)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
142084213 (NFKB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
142084213
NCBI-ProteinID:
XP_075010613
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All DBs
Position
7
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AA seq
932 aa
AA seq
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MLGLDGLLRPASSSPAGGRPRAIMDEQFQPCLDGIDYEDFNFSSHMMEQKEPLMETVEGP
YLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLVTH
SDPPRVHAHSLVGKQCNEAGNCIAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKKQK
MRNRSHLPTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSNGNFTLALQPVISDPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSP
TDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERK
RKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLAYNSIYSPGPHPVGGY
QGGVQMKGPEAEGPGSDRQAPAESVYCKELQKHAQLCQLWMLALARRNAHALLDYSVTAD
PRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIEVIVSIPRQQIINISNNLQQT
PLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQAGDEEMLRMLLAHLGSAAPY
LLHLPNFHGLLPVHLAVKAKNLACLDLLVRKGADVNAVERQGGRTLLHLAVEMENLNMAT
HLVKKLGADVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPVSPSSSEASS
DTDADPEEQELAMELGEPAVEHGTNPQPPAQGHGQAGHRQRRCHTPLDLTRSQKVREILL
QASQQGPEVELPTAPWPGKVLSLDSEALQGLEQLLNQDCSGSDWIELAKRLGLCSLVETY
KDTPSPSISLLRSYELAGGSLGGLLEALDSMGLRKAVRMLHKTEALEKLQSTELKEDSAY
GSESVEEEQAPALALKPGQGGELPHSQQPQVH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggttgctgagaccagcctcttcctccccggccggcggccggccc
cgcgcaatcatggacgagcagttccagccctgcctagatgggattgactacgaggacttc
aattttagttcccacatgatggagcagaaggagcccctgatggagaccgtggaaggtccc
taccttgtcatcatcgagcagccaaagcagcgagggttccggtttcggtacggctgcgag
ggcccttctcatggggggctgccgggagcatccagcgagaaagggcgcaagacctatccc
accgtcaagatctgcaactacacagggatggcccggatcgaggtggacctggtgacgcac
agtgaccctccccgcgtgcatgcccacagcctggtgggcaagcagtgcaacgaagccggc
aactgcattgcgatcgtgggacccaaggacatgacggctcagttcagcaacctgggtgtg
ctccacgtcaccaagaagaacatgatggagatcatgaaggaaaagctgaagaagcagaag
atgcgtaacaggagccatctgccgacggaagcggagctgcgtgagatcgagctggaggcg
aaagagctgaagaaggtgatggacctgagcatcgtgcggttgcgcttcaccgcctacctc
cgcgacagcaatgggaacttcacgctggccctccagcctgtcatctcagaccccatccat
gacagcaagtccccaggagcttccaacctgaagatctcgcggatggataagacggcaggc
tcggtgcggggaggggacgaggtctacttgctgtgtgataaagttcagaaagatgacatt
gaggtgcgtttctacgaggatgacgagaacggctggcaggccttcggggacttctccccc
actgatgtgcacaagcagtatgctatcgtcttccgcacgcccccctaccacaagcccaag
atcgaccgtcccgtcaccgtcttcctgcagctgaagcggaagcgggggggcgacgtgagc
gactccaagcagttcacctactaccccgtggtggaagataaggaagaagtggagaggaag
cgcaagaaagtcctgcctcagtttccccagcattttggcgggggctcgcacatggggggt
gctggcgggggggccgggggcttcggctctggaggaggcgggaacctcagcttcccctac
tcccctgggctggcctacaacagcatctactcgcccggcccccaccccgtggggggctac
caggggggtgtgcagatgaagggccccgaggcagaggggcccgggagcgacaggcaggcg
cctgcggagagcgtgtactgcaaggagctgcagaagcacgcccagctttgccagctgtgg
atgctggcgctggcccgtcgcaatgcccatgccctgcttgactactcggtcaccgccgac
ccccgcatgctgctggcggtccagaggcacctggctgcatcgcaggacgagaacggagac
acgcctttgcacctcgctattatccatgagcagacggctgtgatcaagcagctgatcgag
gtcattgttagcatccccaggcagcagatcatcaacatctccaacaacctgcagcagacg
ccgctgcatctggcagtcatcaccaagcagccccaagtggtccagctcctgctgcaagcc
catgccgaccccaccttgctggaccgctacggcaattccctgctgcacctggcgctccag
gctggcgatgaagagatgctgaggatgctgctggcccacctgggctcggctgccccttac
ctgctccacctgcccaatttccatggcctcctgcctgtgcacctggctgtgaaggcaaag
aatctggcctgcctggacctgctggtcaggaagggagcggatgtgaatgcggtggagagg
cagggtgggaggaccctgctgcacctggccgtggagatggagaacctgaacatggccacc
cacctggtgaagaagctgggagcagatgtcaacagccggacctttgctgggaacacccct
ctgcacctggctgctggcctgggctcccccaccctcaccaaactactcctcaaagccggg
gcagacgtgctgtgtgagaacgacgagcccgtcagcccgtcctcgtcagaggccagcagc
gacacggatgccgaccctgaggagcaggagctggctatggagctgggggagccagccgtg
gagcacggcaccaacccccagccccctgcacaggggcacgggcaggcggggcacaggcag
cgccgctgccacacgcccctagacctgactcgaagccagaaggtgcgggagatcctgctg
caggcctcccagcagggccccgaggtggagctgcccactgccccctggccagggaaggtc
ctgtcgctggacagtgaggcgctgcaggggctggagcagctgctgaaccaggactgcagt
gggtcggactggatcgagctggccaagcgcctggggctctgcagcctggtggagacctac
aaggacaccccctcgcccagcatcagcctcctgcgcagttacgagctggcggggggcagc
ctggggggcctgctggaggcgctggactccatggggctccgcaaggccgtgaggatgctc
cacaaaacagaggcgctggagaagctgcaaagcacagagctgaaggaagacagtgcctat
ggcagtgagtcggtggaggaggagcaggcgcccgcgctggccctgaagccaggacaggga
ggcgagctgccccacagccagcagccgcaggtgcactga
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