Calonectris borealis (Cory's shearwater): 142084273
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Entry
142084273 CDS
T11211
Symbol
MYOF
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142084273 (MYOF)
Membrane trafficking [BR:
cbor04131
]
Endosome - Lysosome transport
Others
Ferlins
142084273 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Motif
Other DBs
NCBI-GeneID:
142084273
NCBI-ProteinID:
XP_075010816
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Position
7:25996006..26071281
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AA seq
2058 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKIDSELNPVWNEILEFDLKGIALD
SSSSLTIIVKDFETIGQNKLIGSASIALKDLVGNQSRSFPFKLIPLLNERGQETGATIDL
VVGYEPPAGPPNPNDPGGTNTQEDGDDDGGYEDGLDGPVGGITPTVPSGTKEAQLAKRIT
KGKKTRRILSNKPQDFQIRVRVIEGRQLPGNNIKPVVKVHVCGQTHRTRIKRGNNPYFDE
IFFYNVHMTPLELLDETVSIRVYDSYSLRADCLMGEFKIDVGYVYDEPGHAIMRKWLLLS
DPEDTNSGAKGYMKVSMFVLGTGDEPPVEKRERDNESDDVESNLLLPAGIALRWVTFLLK
IYRAEDIPQMDDAFAQTVKEIFGGEADKKNLVDPFVEVSFAGKKVCTNIIEKNANPEWNQ
IIYLQIKFPSMCEKIKLAVVDWDRLTKNDVVGTTYLSLSKIASSGGEVEEFSSSGTGASS
YEVNTGETEVGFLPTFGPCYLNFYGSPREYTGFPDPYDELNFGKGEGVAYRGRILVELST
ILESKPVNKKLEMIPNDDLLVVEKYQRRRKFCLAAVFHSATMLQDTGEPIQFEVSIGNYG
NKFDTTCKPLASTTQYSRAVFDGNYYYYLPWANTKPVVTLTSFWEDISHRLDPLNVILNM
AERLQSNLATLKSGMQAKISENQLAEMWLKLIDELTEDISKPFPLIEGKSNITVLDTQIE
KLRLKSLIQIGEAAARMRNEATDVKATLTEIEYWLDKLLQLSEEPQNSMPDVIIWMIRGE
KRLAYARVPAHQVLYSTTSPESSGKYCGRTQTIFLKYPQDKTKDVKVPVELRINIWLGLS
AVEKKFNTFAEGTFSVFAEMYENQALLFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPPK
GWEWEGEWMIDPERSLLTEADAGHTEFTDEVYENESRYPGGEWKAAEESYTDVNGEKAPP
PREFTCPLGWMWEDDAWKSDLNRAVDEHGWEYGITIPPDTKPKSWVPAEKMYHTHRRRRM
VRKRKRDPAQAVTAGRGMSLYEDQEGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPSE
THGAAAIFKLEGALGADTTVDDGEGKSSDKTKESATKVFGANTPLVSCYFDRVYTYHLRC
YVYQARNLMALDKDSFSDPYAHVSFLHQSKTTEIIHSTLNPTWDQTLILNEIEIYGDPQT
VAQNPPNVVIELFDSDQVGKDEFLGRSVCSPMVKLTPEEDITPKLLWYPVTNNGKASGDI
LFAAELILRDKGGTNLPILPSQRAPKLYMVPQGIRPVVQLTAVEILAWGLRNMKNYQLAP
VTSPSLIVECGGEMVESVVIKNLKKTPNFPSSVLFMKVLLPKEELYSPSLVIKVIDHRPF
GRKPIVGQCTINLLESFRCDPYTTKEDIAPQLKVSLLSAAPRQDTVIEMEDTQPLLAAQL
TEKEEEIVDWWSKFYASVGEHEKCGQYIKKGYDTLKVYDCELEKVPEFNSLTDFCDTFKL
YRGKSEDSDDPSVVGEFKGSFKIYALPDDPTIPAPPRQFRELPDSGPQECIVRIYIVRAL
QLQPQDNNGLCDPYIKISLSKKVIEDRDNYVPNTLNPIFGRMYELSCFLPQEKDLKISVY
DYDTLTRDEKVGETIIDLENRFLSRYGSHCGIPQQYCISGVNTWRDQLKPTQLLQNVARF
KGYAPPVLSENGRKINYGGRDYSLEEAEANKILHQHLGPGEERLALHILRTQGLVPEHVE
TRTLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYILRVIVWNTKDVLLD
EKSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLCVV
SKKEHFWSLDKTEFRIPPKLIIQIWDNDKFSLDDYLGFVELDLHKAIIPAKVPEKCNIDM
IPEYKADSSQKAPRTASLFEQKSMKGWWPCYVEKDGSRILAGKVEMTLEVVNEKEAEERP
AGKGRDEPNMNPKLDLPNRPDTSFLWFTNPCKTMKFIVWRRFKWLFIGLIILLILLLFVA
VLLYSLPNYLSMKIVKPI
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtggaatctgctaccaatatccctaaaaccaagttcgggaaacca
gatcctattgtttctgttatttttaaagatgaaaaaaagaaaacaaagaaaattgacagt
gaactgaatcctgtttggaacgagattcttgaatttgacttgaaaggaattgctctggat
agttcatcttccctgacaattattgtgaaggatttcgaaacaattggacaaaacaaatta
attggcagtgcatccatagcacttaaggatcttgtaggtaaccagagcagatcttttccc
ttcaaactcatacctctgctaaatgaaaggggacaagaaactggagcaacaattgatttg
gtagtaggatatgagccaccagctggacctccaaatccaaatgatccaggagggaccaat
acacaagaagatggagatgatgatggaggttatgaggatggcttggatggtccagttggt
ggtatcacaccaacagttccaagtggcacgaaggaagcccagctagctaaacgcatcacc
aaaggaaagaaaacacggagaatcctttctaacaaaccgcaagatttccagattcgtgtt
agagtcattgaaggtcgtcagttgcctggaaataacataaaaccagtagtcaaagttcat
gtttgtggtcagacacaccgaacaagaatcaaaagaggaaacaacccatattttgatgaa
atatttttctacaatgtccacatgactcctttagaattgcttgatgaaacagttagcatt
cgggtgtatgattcttattctctacgagcagactgtctaatgggagaatttaagattgat
gttggctatgtttatgacgagcctggccatgcaatcatgagaaaatggctattgctgagt
gatcctgaagatacaaattcaggagctaaaggctatatgaaagtcagcatgtttgtcctg
ggaactggagatgagccaccagttgaaaaaagggaaagagataatgaaagcgatgatgta
gagagcaatctgttattacctgctggaattgcacttcgatgggttactttccttctcaaa
atctacagagctgaggacattccgcaaatggatgatgcttttgcacagactgtcaaggaa
atatttggaggagaagcggacaagaaaaacctggtagatccatttgtagaagtttctttt
gcggggaaaaaggtttgcacaaatataattgagaaaaatgctaatccagagtggaatcaa
ataatttatcttcaaatcaagtttccctcgatgtgtgagaaaataaaacttgcagttgtt
gactgggatcgtcttacaaaaaatgatgtagtaggaacaacatatttaagtctctcaaaa
attgcttcttctggaggagaagttgaagaattttcatcttcgggaacaggggcttcatca
tatgaagtaaacactggagaaactgaagttggctttttaccaacatttgggccttgttac
ctaaacttctacggaagtccaagagaatacactggattcccagacccatacgacgaatta
aactttggaaagggagaaggagttgcttatagagggagaattctggttgaactatctaca
atacttgaaagcaaacctgttaataaaaagttagagatgattcctaatgatgacttactg
gttgttgagaaataccagcgcagacggaagttctgcttggctgctgtgtttcattctgct
accatgctgcaagacactggggagcctatccagtttgaagttagcattggtaactatggc
aacaagtttgataccacctgtaaacctttggcatcaacaactcagtacagtcgtgctgtt
tttgatggtaattattattactacttgccgtgggcaaacacaaagccagttgtaacgctg
acttccttttgggaggacataagtcatagattagaccctctgaatgtaatcctaaacatg
gctgaaagactgcaatccaacttagccaccttaaaatcaggaatgcaggctaaaatttct
gaaaaccaattagctgagatgtggttgaagctgattgatgaacttacagaagatataagt
aaaccatttcccctcatagaaggcaaatctaacattacagtccttgacactcagatagaa
aaactgcgcctcaagtctctcatacagattggagaagcagcagcaaggatgagaaatgaa
gctactgatgtgaaagccactctgacagaaattgagtactggttggataaattactgcaa
ctgagtgaagagccacaaaacagtatgcctgatgtaatcatatggatgatccgaggggag
aaaagactggcttatgctcgtgttcctgcacaccaagtgctgtattccacaacgagcccc
gaatcatctggtaaatattgtggaaggacccaaacaatcttcttaaagtacccacaggac
aagacgaaagatgtcaaagtgcctgtggagttgcgaattaacatttggcttgggctcagt
gcagttgaaaagaagtttaatacctttgcagagggaacgttcagtgtttttgcagaaatg
tatgaaaatcaggctcttctttttggaaagtggggtacctcaggacttgttggtcgccac
aagttttccgatgtcacaggaaaaatcaaactgaaaagagagtactttctacccccgaag
ggctgggagtgggaaggagaatggatgattgatcctgaaagaagtttgttgactgaagct
gatgctggtcatactgagtttactgatgaagtatatgaaaatgagagtcgctatcctgga
ggggaatggaaagcagctgaagagagttacacagatgtgaatggagaaaaagctccaccg
ccacgtgagttcacgtgtcctcttggatggatgtgggaagatgatgcttggaaatctgat
ttaaatcgagcagtggatgagcacgggtgggaatatggaattactattcctccagacact
aaaccaaagtcatgggttcctgcagagaaaatgtaccatacacatcgacgacgaagaatg
gtgcggaaacgtaagagggatccagctcaagcagtaacagcaggaaggggaatgtcactg
tatgaagatcaagaaggatgggaatacgcttccttgattggctggaaatttcactggaaa
caacgcagttctgatactttccgtcgaagacgatggagacgaaaaatggctccgtcagag
acacatggtgcagcagctatctttaaacttgaaggtgctttgggagcagacactactgtc
gatgacggagaagggaagagttcagacaaaaccaaggagtcagctacaaaggtgtttggt
gccaatacaccacttgtttcctgctactttgacagagtatatacttaccaccttcgctgt
tacgtctaccaggcaagaaatctcatggctttagacaaagacagtttttcagatccgtat
gctcatgtttctttcctccatcaaagcaaaacaactgagatcattcattcaactctaaat
cctacatgggaccaaactctcatacttaatgaaattgagatctatggggacccacagaca
gtagcccaaaacccaccgaatgttgttattgaactttttgatagtgaccaagtgggtaaa
gatgaatttcttggaagaagtgtttgttcccccatggtcaagttaaccccagaagaggac
atcacaccaaaactgctctggtatcctgtaacaaataacggcaaagctagtggagacatt
ctttttgctgcagaacttattttgagggacaagggtggcaccaaccttccaattcttcca
tcacaaagagcaccaaagctttacatggtacctcaaggaatcagaccagtagttcaactc
actgctgttgagattctggcttgggggttgcggaatatgaaaaattaccaactggcacct
gttacgtctccgagtctcattgtggaatgtgggggtgaaatggtagaatctgtggtgatc
aaaaacctcaaaaagacaccaaattttccatcttctgttctcttcatgaaagttcttttg
ccaaaagaggagttatacagtccatctcttgttattaaagtaatagaccacagaccattt
ggacggaagcccatcgtgggacagtgtactattaatttactggaaagctttcgctgtgac
ccctacactactaaagaagacattgcaccgcaactgaaagttagtctactctctgctgca
cctcgccaggatacggtaattgaaatggaagacacacagccactgctagcagctcagctt
acagaaaaggaggaagaaattgttgattggtggagcaaattttatgcttcagtaggagaa
catgaaaaatgtggacagtatattaaaaaaggatacgacacgctaaaggtatatgactgt
gaattggaaaaagtacctgaatttaatagcttaacagacttctgtgatacatttaaacta
tacagaggcaaatctgaggacagtgatgatccgtcagtggttggcgaattcaagggatcc
tttaaaatctatgcgttacctgatgatcccactattccagctcctcctcgccagttccgt
gagctaccagacagtgggcctcaggagtgtattgtgcgaatttatattgttcgagctttg
cagcttcaaccccaggataataatgggctgtgtgatccttatataaaaatatctttaagt
aaaaaagtcattgaagacagagataattatgtgcctaatactctcaacccgatttttggc
agaatgtatgaactcagctgcttcttgcctcaagaaaaggatctgaaaatttcagtctat
gactatgacacattgactcgtgatgaaaaagtgggtgaaaccataattgatcttgagaac
agattcctttctcgttatggatctcactgtggcatcccacagcagtattgcatttcaggt
gtgaatacctggcgtgaccaactaaaaccaacccagttattgcaaaatgtagccaggttt
aaaggttatgctcctcctgtcctctctgagaatggtagaaagattaactacgggggacga
gactatagtttggaagaagctgaagctaacaaaattttgcatcagcatcttggtccaggt
gaagagcggctagcccttcatatcctcagaacccagggtttggtacccgaacatgtggag
acgaggaccttatatagcaccttccagcccaacatctcccagggaaagctccagatgtgg
gttgatgttttccccaaaagcttaggacctccaggccctcccttcaacatcactccccga
aaagccaagaagtatatcttgcgggtgattgtctggaacaccaaagatgtccttctggat
gaaaagagcatcacaggggaagaaatgagtgacatttacgtgaagggatggatgcctggt
aatgaagaaaataagcagaaaaccgatgttcactaccgatcattggatggtgaagggaac
tttaactggagatttgtttttccttttgactatctcccagcggagcaactctgtgtagtt
tccaaaaaggaacatttttggagtcttgacaagacagaattcagaatcccacccaaactg
atcattcaaatatgggataatgacaagttctccttggatgactatctgggctttgtggaa
cttgatttacataaagcaatcattccggcaaaagttccagagaagtgcaatatagacatg
attccagaatacaaggcagacagttctcagaaggctcccaggaccgcctctctctttgaa
cagaaatccatgaaaggatggtggccatgctatgttgaaaaggatggctcccgtatttta
gcgggtaaagttgaaatgacgttggaagttgtcaatgaaaaagaagctgaggaaaggcca
gctggtaaaggaagagatgaacccaacatgaaccccaaactagatctaccaaaccgacca
gatacttccttcctttggttcacaaatccctgcaagacaatgaaatttattgtgtggcgc
aggtttaaatggctctttataggcctcatcatcttgctgattttactcttgtttgtagca
gtactcctctattcattgccgaactatttgtcaatgaagatcgtgaaaccaatttaa
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integrated database retrieval system
