Calonectris borealis (Cory's shearwater): 142084317
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Entry
142084317 CDS
T11211
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142084317 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142084317 (EXOSC1)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
142084317 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
142084317 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
142084317
NCBI-ProteinID:
XP_075010944
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All DBs
Position
7:28319264..28321928
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AA seq
207 aa
AA seq
DB search
MRASAGALPAANMAPPARYCVPGERLCSAEEATAGSGTYTRHGFIFSSLAGCLEKRGEES
GLPVVSVVRDAESQLLPDVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDI
RATEKDKVEVYKSFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPIS
WCEMQCPRTHTKDFRKVARVQPQFLQT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagggcttctgcgggcgcactcccggcagccaacatggcgcctcccgctcggtattgt
gtccctggcgagcggctgtgcagcgcggaggaggccacggctggcagcgggacttacacc
cggcacggcttcatcttctcctcgctggctggctgcctggagaagaggggcgaggagagc
gggctgcccgttgtctcggtggtgagagacgccgagtcccagctcctgcccgacgtgggg
gctgtggtgacatgcaaggtctgcagcattaactctcgcttcgccaaggtgcacatcctg
tatgtcggctccacgcctctgaagtccaccttccgggggaccatacggagagaagatatt
cgagccacggagaaagataaggtggaagtgtacaagagtttccgccccggtgacatagtc
ctggccaaagtcatctcgctgggggacgcgcagtccaactacctgctgagcacggcggag
aacgagctgggcgtggtggtggcgcgcagcgaggcaggggtacagatggtgcccatcagt
tggtgtgagatgcagtgcccgcggacgcataccaaggacttccgtaaggtggcccgcgtg
cagccccagttcctgcagacctag
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