Calonectris borealis (Cory's shearwater): 142084332
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Entry
142084332 CDS
T11211
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03410
Base excision repair
cbor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
142084332 (POLL)
03450 Non-homologous end-joining
142084332 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142084332 (POLL)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
142084332 (POLL)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
142084332 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
142084332 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
LIG3_BRCT
PTCB-BRCT
HHH
NTP_transf_2
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
142084332
NCBI-ProteinID:
XP_075010983
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All DBs
Position
7:28959577..28977352
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AA seq
624 aa
AA seq
DB search
MIALCWLVCEKLLSKTRSAAQRGNQAGVDLTLQPAIAAKLRTRPMEPRGIVKAFPKRKKV
RDDSGKSVPPKIPKEEGTEIPEAEWLKPVTAYVLQAGIGQARAEIFHKQIVQNGGVVHNQ
LSSEVTHVIVAEDMDCDRAFRLLKLTKLHSGLQLVKASWLSACIRDQKLLSTAGYGVFIP
HSRYLEEGKLQKEQQQQVLGSEKIQPPAEEGAVEPNTEAQAEDSSQRGLGTLGQQQLAEK
VSDDEDSEGEDASVTQGDLEALISGRYPVKSSEEIGDSSSAVAQPASKWVCAHSSNSKKE
NHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSYQEACKIPGIGKGMA
EKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQGFRTLDDIRTKATLT
SQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACGSYRRGKPTCGDVDV
LVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLVNQDIGDQKKYLGVCRLPGPARRHRRLDI
IVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSWAVVRDPGGVKVASGHTL
PTPTERDVFIQLGLPYREPSERDW
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatagctttgtgctggcttgtgtgcgagaaacttctaagcaaaacacgaagtgctgca
cagagaggaaaccaagctggcgttgacttaacgctgcagccagcaattgcagctaaactt
cgcaccaggcctatggagccacgagggattgtcaaagcctttcccaagaggaagaaggtg
agggatgactcagggaaaagcgtccctccaaagatcccaaaagaggaaggaacagagata
cctgaggcagagtggctgaaacccgtcactgcctacgtgttgcaagctggcattggccaa
gccagggcggagatcttccacaagcagattgtccagaatgggggtgttgtacacaaccag
ctctcctcggaggtgacgcacgtcatcgtggctgaagacatggactgtgatcgggccttt
cggctccttaaattaaccaagctacattcagggttgcagctagtgaaggcatcctggcta
agtgcttgcattagagaccagaagctgctgagtaccgctggctacggtgtctttatccct
cacagcaggtacctggaggagggcaaactgcagaaagagcagcagcagcaggtcctgggc
agtgaaaagatccagcctccagcagaggagggagcagtggaaccaaatactgaagcacag
gcggaggattcctcgcagcgaggcctgggcacccttgggcagcagcagctggctgagaaa
gtctctgatgatgaagacagtgaaggagaagatgcaagtgtcacccagggagatctggaa
gcattgatttctggccgctaccctgtgaaatcgtcagaggagatcggtgacagctcttcc
gcggtggcccagcctgccagcaagtgggtttgtgcccattcctccaacagcaagaaggag
aatcacaaccagtgcatcacagagaagctggaagtgctggcaaaggcctattctgtccag
ggggacaagtggagagctctgggctactccaaagccatcaatgcactcaagagctaccac
aaaccagtcacctcctaccaggaagcctgtaaaatccctgggattgggaagggaatggca
gagaagattctggagatcttggagagtgggcacctgcgcaagctggatcacatcagtgag
agtgttcctgtgctggagttgttttccaacatctggggagcaggggtcaagacagctcag
atgtggtaccagcagggtttccggacactggatgatatccgcaccaaggcgactctcacc
agccagcaagctgtggggctgaagcactacacggatttcctggagcgcatgcctcgggag
gaagctgcagaaatagaacagaccgtcagacaagctgccctggctctgaagcctgggctc
gtgtgtgtggcatgtggctcctaccgtcgggggaagcccacctgtggagacgtggatgtg
ctggtcactcacccagatgggcagtctcaccgtggggtgttcagcaagctgcttgacagc
ctccacaggagcggcttccttacggatgacctggtgaatcaggacatcggtgatcagaag
aagtacctgggggtgtgccgcctccctgggccagcccggcgtcaccgccggcttgacatc
atcgtggtgccttacagtgagttcgcctgtgccctgctctacttcaccggctcagctcac
ttcaaccgctccatgcgggccctggccaagaccaagggtatgagcctctcggagcacgcc
ctcagctgggctgtggtgcgagaccctggaggcgtcaaggtggcatctggccatactctg
cccactcccactgagagagatgttttcattcagctggggctgccttaccgggagccctca
gaacgggactggtga
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