KEGG   Calonectris borealis (Cory's shearwater): 142084379
Entry
142084379         CDS       T11211                                 
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
  KO
K24223  cilia- and flagella-associated protein 43
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cbor03037]
    142084379 (CFAP43)
Cilium and associated proteins [BR:cbor03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   142084379 (CFAP43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR5 CFAP43_N WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WD40_Prp19 WDR55 Beta-prop_WDR3_2nd ANAPC4_WD40 WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_VPS8 PPP1R21_helical DUF8111
Other DBs
NCBI-GeneID: 142084379
NCBI-ProteinID: XP_075011101
LinkDB
Position
7:complement(30718838..30769200)
AA seq 1701 aa
MEAAGEAHGAGPASEELRAEAPRGRHCSSVEEAALEVSWVQGFSNKNFGFVNNQTICYPC
GNYILFLDIETKKTTVLQCQTGQVGAFAANGNSQVLAFSDRKLNPIIYIYTFPELSKLTE
LKGNAQLDYTLLAFSFTGPYLASYSSIPEFVLSVWNWQENILLCSESQPGVTATSLSFNP
MNWQQLCFVNETSITIWHIERNKDEHHLKGNPVKLPDGQGSVSPHEDLFFPVSCSEDPYH
GPDLPVSAIAGLVGDEAETFMPRNYIKPSVHLTAHCWTATSEIYMGCKEGYVLAIDAETR
SVSILQQKPLPEYMRKVSDVVSYVRREVQKKKGGKTTDLQKRVLFAMAFCNEGLYAAGSE
GVLFFYHIKSLQYEVKICADILQPISSLIFSPDYTVLLLVTDQGTVYTYKPAHSGEAVKL
LDACSSCFLAADFLTPGNKYCVSVTTSGEVQVWFLEDATCLSKLNLDIEATAMACCPSSN
SVAVGTKKGQIYFLDVTKVEAPRVVHRIFLSKFPVLSLHYDQSGQFLIARATEGHIFILD
ARPSKLFQVLGYVVLADEVMDLSVVSDFKNDLVEVVVLLNVAEVQRARLEIFCLSSALIT
DNDKYVNEQGMLNPSAIKKEQYDLDYPLSSAVRSKDKIVYGYCTCAPFICKYHLSEENML
EDPSVFLSEKRTPSNQFGSGFLCLSPNSRWLASAAKDGVLFIYCAFTMDILAQKHCHSYQ
GGGIRSMVFSLDGKFILVNGENDGALVCLKWKKIKKIEVKEAAFHWQSLLAILNKSTSDE
NVVLKSMAEWQFEPESTLETLAEEKFKEAPLKSSNVDVTEEDGNITSLYSAGTNDMTWIG
QKIKKVIREETERFANQKKELQMGIKKLRKTIQKMMHENEQVPDIEKLEQQEFNLDIEEQ
ERAQAEAEQEVARVRKEIEMENLANRYLQDVIKHECWDAMCVKGRAVKCFHMACEVKNYP
LKERSEEELETLEKVLQLKKIETGDLKVQKKNLEIKSETVLSKEGEKAEVMADDSASYCL
IGSLSSQYGGDTSILYHQWDLHTREQKVNQIVLLKDIIYKVKTAFNKEFDIVARQKEQEI
ARVKERNLRIREILAQLDLQVEVWEPALTEDEIPERALTVQDSEIKVENYLTHQETEKAE
MLAKLEMERRLPAMDNERLRALDDMMGGVLEVKKEDILKMDIPPPPFISKPEHVWNDEEK
KIFREHERKVKELNEEKEKYRRSLENELKKLEASIQETTENFDETVCKLSERKVKLEMVI
YQEELKIVNLVYALLLNEELDTREAGLHNFLMKKEKEKVKTARTIQTTKNKIEAYIDTYE
NAIAEEKNLECGFTKEFADVPANLLDELFQLYKHRPKTPVTERLLDTTNPYGDCSGSAED
HKDALTLLMKAMDELDSPEHMPNGLDPSIWEHFCLARRNKMESEELVKWKALTLAEMQAF
LQRRMDDNEKIKSEIEDIFQELTWLQEEKMKLQLNLTIQFLLKQGQVELESTEIPEYTDA
ILIHKSVIEELNCSIMAQGEKKIASMVECKEFSKGIFQLEWEHKKMRMQIEDLKQKARDI
VTLPISKDRQLFLTVLNYDSRIAHHISVMEQTLGIMDKLHKKNVKNRQKRIKELEKCISL
KAQANYELSLKLKEMLISVSERRHIFEAAGESHTFPKIAKQRYREILKQKHLRGLVKEQE
EQFEILQEEVERLRSRTFPIL
NT seq 5106 nt   +upstreamnt  +downstreamnt
atggaggcggctggtgaggcccacggcgcgggcccggccagtgaggagcttcgcgccgag
gccccgaggggccgacactgctcctcggttgaggaggccgcgctggaagtgagctgggtt
cagggattctcaaacaagaactttggctttgtcaacaatcaaactatctgctacccttgt
ggcaattacatcctcttcctggacattgaaacaaagaagacgacagtgctgcagtgtcag
actggccaggtgggagcctttgcagcgaatgggaacagtcaagtgctggccttttcagac
cggaagctgaatcccatcatatatatctacacttttccagaactgagtaaactgacagaa
ttaaaaggtaatgctcagctggactacaccttacttgcgtttagtttcacaggcccatat
ctagccagttactcttcaatcccagaatttgttctttcagtatggaactggcaagaaaat
atcctcctgtgcagtgaatctcagccaggggtaacagcgacctctttaagttttaaccct
atgaattggcaacaactgtgttttgttaatgagacctccattactatctggcatattgaa
aggaataaagatgagcatcaccttaagggaaaccctgtgaaactccctgatggacaaggg
tccgtgagtcctcatgaggatttgtttttcccagtttcttgtagtgaagatccgtaccat
ggccctgatttgccagtttcagccattgctggactggtaggagatgaagcagaaacattc
atgcctagaaattatattaaaccttcagtgcatcttactgcccactgctggactgcaacc
tcagaaatttacatgggctgtaaagaaggatatgttttggcaattgatgctgagacacgc
agtgtttctattcttcaacaaaaacctctacctgaatacatgcgtaaagtatcggacgtg
gtgtcatatgttcgtagagaagtacagaaaaagaaaggtggcaaaacaacggatctgcaa
aaaagagttttatttgccatggcattttgtaacgagggactgtacgcagctggaagtgag
ggcgttttattcttttatcacatcaaaagtctgcaatatgaggtgaaaatctgcgctgat
atcttacaacccatatccagcctcatattctctcctgattacaccgtacttctgcttgtc
actgaccaggggacagtctatacttacaaacctgcccacagtggagaagctgtcaaactc
ttggatgcatgcagcagttgttttctggcagctgattttcttactccagggaacaagtac
tgtgtgtctgtaacaacttcaggtgaagtacaagtttggttcctggaagatgcaacttgc
ctcagcaagctaaaccttgatattgaggcaactgctatggcttgctgtccctcctccaac
agtgttgctgtagggaccaaaaaaggtcaaatctatttccttgatgttaccaaagttgaa
gctccacgggttgttcacagaatttttctttccaagtttccagtgctgtctttgcattat
gatcagagtggccagttcctcatcgctagagctacagaaggacatatctttattctagat
gcccgaccttcaaaattattccaagttcttggatatgtagtgttggcagatgaagtgatg
gatctttctgtagtttctgacttcaagaatgacttagttgaagtggtggtacttcttaat
gtagcagaggtccagcgagcaagactggaaattttttgtctgtcttcagcactcataaca
gataatgataagtatgttaatgaacaaggaatgcttaatcctagtgccattaaaaaggag
caatatgatctggattaccctttgagctcagcagtcagatcgaaggataaaattgtctat
ggctactgtacctgtgcacctttcatctgtaaataccatctctctgaagagaatatgttg
gaagatccatcagtatttttatcagaaaagaggactcctagcaatcagtttggatcaggt
ttcctctgtttatcacccaacagccggtggctggcatcagcagcaaaggatggtgttttg
ttcatctattgtgcttttactatggatatacttgctcaaaagcattgtcactcatatcaa
ggagggggaatcagatccatggtattttcgctggatggcaaattcatcctcgttaatggc
gaaaatgatggtgccctggtgtgtctgaaatggaagaagataaagaaaattgaagttaag
gaagctgcttttcactggcaatctcttcttgctatactgaacaagtctacttcagatgaa
aatgttgttttaaaatctatggcagaatggcagtttgagccagaatccacattggaaaca
cttgcagaagagaaatttaaggaggcaccgcttaaatcttccaatgtagacgtgacagaa
gaagatggaaacattaccagtttgtattcagccggtaccaatgacatgacatggataggt
cagaaaataaagaaggtcattagagaagagactgagaggtttgctaaccagaagaaagag
ctgcaaatgggaattaaaaagctgcgtaaaactattcagaaaatgatgcatgaaaatgaa
caggtgccagacattgagaaactggagcagcaggagttcaacctggatatagaagaacag
gaaagagcgcaagcagaggctgaacaagaagtggccagggtgaggaaggagattgagatg
gagaatttagccaaccgctatttgcaggatgtcatcaaacatgagtgctgggatgctatg
tgtgtaaaaggccgtgcagttaagtgcttccatatggcttgtgaagtgaagaattatcca
ctgaaggaacgtagtgaagaagagctggaaactttggagaaagttctccagttaaagaag
attgagacaggtgatcttaaggttcagaagaaaaatcttgagatcaagtctgagactgta
ttatctaaggaaggagaaaaggcagaagtaatggctgatgatagtgcatcttactgcctg
attggaagtctgagctctcaatacggtggagacacatctatcctataccatcaatgggac
ttgcacaccagggagcagaaagtcaatcagatagtattactgaaggacatcatttacaaa
gtgaaaactgcttttaataaggaatttgacatagttgcacgacaaaaggagcaggagata
gcacgagtgaaagaaagaaacctcaggatccgagaaatcttggcacaacttgacctccaa
gtggaagtgtgggagccagctcttacagaggatgagataccagagcgagcactcactgtt
caggattcagagattaaagttgaaaactacttgactcaccaagagacagagaaagcagaa
atgctggctaagcttgaaatggaaagacgccttcctgctatggacaatgaaagactgcgt
gctcttgatgacatgatgggtggagtgctggaagtcaaaaaggaagacatcttgaaaatg
gatattcctccacctccttttatatccaagcctgagcatgtttggaatgatgaagaaaag
aaaatatttagagaacatgagagaaaagtcaaggagctgaatgaagaaaaagaaaagtat
agaaggtcactggaaaatgaattgaagaaacttgaagcttccatccaggaaacaacagaa
aattttgatgagactgtgtgcaaactctctgaaaggaaagtgaaattagagatggtcatc
tatcaggaagaactcaaaatagtcaatctcgtttatgctttactgttgaatgaagagttg
gacactagagaagctggacttcataacttccttatgaaaaaggagaaagagaaggtcaag
actgcaagaacaatccagactacaaaaaataaaatcgaagcttacatagacacctatgaa
aatgcaatagctgaagagaagaatctggaatgtggttttacaaaggagtttgctgacgta
cctgccaatctccttgatgaacttttccaactttacaaacatcgaccaaagacgccagtg
acagaaaggctccttgacaccactaacccatatggggactgttcaggctcagctgaagat
cacaaagatgcacttacccttttaatgaaagccatggatgaactggatagtcctgagcac
atgcctaatggcttagacccatctatatgggaacatttttgtctagctagacgaaataaa
atggagagtgaggagctggtgaaatggaaagccctaacattggcagagatgcaggccttt
ctccagagaagaatggatgacaatgagaagattaaatcagaaatagaagacattttccaa
gaactcacttggctgcaggaggagaagatgaaacttcaattgaatttgactatccagttt
ttgctaaaacaaggacaggtggaattggagagtactgagatcccagaatacactgatgcc
attctcattcataagagtgttattgaagaattgaattgctctatcatggctcaaggagaa
aaaaaaattgctagcatggtggaatgtaaagaattctctaaagggatttttcagctggaa
tgggaacacaagaaaatgagaatgcagatagaagatctgaaacagaaggctcgggatatt
gtaacactacctatttcaaaagatcgccagctattcctaactgtgctgaactatgacagc
cgcatcgcccaccacatttcagtgatggagcagactcttggcatcatggataagctgcac
aagaagaacgtgaagaaccgtcagaaaagaattaaagagttggagaagtgcatcagttta
aaagcgcaagcaaactatgagctcagcctgaagctcaaagaaatgctcatctctgtttca
gaaaggaggcacatctttgaggcagccggtgagtcacacacatttccaaagattgcaaag
cagcgttaccgagagattttgaagcagaaacacctacggggtcttgtaaaggaacaggaa
gaacagtttgaaatccttcaggaagaagttgaaagactgagatcgagaacattccctatt
ctttaa

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