Calonectris borealis (Cory's shearwater): 142084388
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Entry
142084388 CDS
T11211
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04110
Cell cycle
cbor04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142084388 (SMC3)
04114 Oocyte meiosis
142084388 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142084388 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cbor00535
]
142084388 (SMC3)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
142084388 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
142084388 (SMC3)
Proteoglycans [BR:
cbor00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
142084388 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
142084388
NCBI-ProteinID:
XP_075011131
LinkDB
All DBs
Position
7:32858667..32890767
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcatgaaggtacaggtcctcgtgttatttcagcgtttgtggaaatt
atttttgacaattcggacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtaatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactcacaaagactgaagttactaaga
gaagtagctggtaccagagtgtacgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggtaagcgagagaagatcaatgagttgttgaaatacattgaagagagactg
cataccctagaagaggagaaagaagagctggctcagtaccagaaatgggataaaatgagg
agagcattggaatacaccatttataatcaggagcttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacaagtggagagaaatccaggcagctgagagatgcacag
caagacgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttcagcaatgaaagaagagaaagaacaacttagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaggctaaagatctgcaggatgaattagctggcaacagt
gaacaaaggaaaagactgttaaaagagaggcaaaagcttcttgagaaaattgaggagaag
cagaaagaattagcagaaacggagccgaaattcaacagtgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacgcaggaaagaacagatctttacgcaaaacaaggt
cgaggaagccagtttacttccaaagaagaaagagataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaggagaaaaatttagaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaggaactggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaagagaatgcagaacaa
caagctcttgctgcaaagcgggaggatttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggcattgtgatgaataacttt
gaatgcgaaccagctttctacacctgtgttgaagttactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcatat
cctgagactaatgatgctattcctatgatcagtaagctgagatacaatccaagatttgac
aaagctttcaaacatgtttttggaaagactctaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcactatggattgtattactctggaaggtgatcaagtcagccat
cgtggtgctttgactggaggttattatgacacaaggaaatctcggcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaactcgaagcaaaactcaatgaaaactta
cgcagaaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgcctaagcaacgcagtttg
cagagcttggaggccagtttacatgctatggagtcaactagagaatcattaaaagcagaa
ctggggacagatttgttgtctcagctcagtctcgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactacagcaagaaaacagacagcttttgaatgagaggattaag
ctagaaggcattatcacaagagttgaaacatatctcaatgagaatctgagaaaacgctta
gaccaagtggaacaagaactgaatgagctacgagaaacagaaggtggcacagttctcact
gctacaacgtcggaacttgaggctatcaacaaacgagtgaaagatacactggctcggtca
gatgatctggataattctattgacaaaacagaagcaggaattaaagagcttcaaaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaaccacgacacaaaa
gaacttgaaaaaatgactaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttgaagcagttattccgcaaactggagcagtgcaatacggaactaaagaaatacagt
cacgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacagaggctacaagtccatcatggagctgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttagtccctggtggcaaggccacgttagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagcactgagagtgaaagggga
tctggatctcagagcagtgtaccatctgtagaccagttcactggagttggcataagggta
tcattcacagggaagcagggtgaaatgagagaaatgcagcaactctcaggtggacagaaa
tcattagtggccctagccctgatatttgctatccagaaatgtgatccagctccattttac
ttgtttgatgaaattgaccaagccctggatgctcagcacagaaaagctgtttcagatatg
attatggaactagctgaacatgctcagtttattacaacaacttttaggcctgaactgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggctaa
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integrated database retrieval system
