Calonectris borealis (Cory's shearwater): 142084421
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Entry
142084421 CDS
T11211
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbor03016
]
142084421 (TRUB1)
Enzymes [BR:
cbor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
142084421 (TRUB1)
Transfer RNA biogenesis [BR:
cbor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
142084421 (TRUB1)
Prokaryotic type
142084421 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
142084421
NCBI-ProteinID:
XP_075011234
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All DBs
Position
7:35295258..35330566
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AA seq
297 aa
AA seq
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MAAREAGGVVLGKSADKLFSLSGLFAVYKPKGPTSAGVLNLLKERLLAEAGVQTTGNKRN
QVLKIGHGGTLDSAAAGVLVVGIGKGTKMLRTILAGSKKYTAIGLLGKATDTLDATGKVT
EEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKGGERLSTLMKRGEAVEAKPARPVR
VYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHA
LYEDKWTIDEIARSLEHCTSLLPGEPSHKKLKTEHPGETAVSCKISDKLGQGKRLND
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagggaggcgggcggcgtcgtgctcggcaagtcggccgataagctcttctct
ctgagcgggctgttcgcggtgtacaagcccaaggggcccacctcggccggcgtgctcaac
ctcctgaaggagaggctgctggcagaagctggtgtgcaaacaactgggaacaaaagaaac
caggttttgaaaattggacatggtggaactttggacagtgcagcggcaggagttctcgtg
gttggtattggaaaaggaacaaaaatgctgagaactatattggcaggttccaagaagtac
actgccattggactactgggcaaagctactgatacattagatgctacaggaaaagtaact
gaagaaaaaccttatgaccagataacaaaaggagatcttgaaaatgtgctgcaaaagttc
acaggggacataatgcaggttcctccactctattctgctttgaagaagggtggagaaagg
ctatcaactctgatgaagagaggagaagcagttgaagcaaagcccgctcggccagtaaga
gtgtacagcctctctctccaacagttccagccaccactgttcacactggatgttgaatgt
ggtggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacatgggccatttacactagaggagcatgcc
ctttatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtct
cttctcccaggagagccatctcataaaaaattgaagacagagcatcctggtgaaactgct
gtgagctgtaagataagtgataagttgggtcaaggaaaaagactgaatgattga
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