Calonectris borealis (Cory's shearwater): 142084516
Help
Entry
142084516 CDS
T11211
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04517
IgSF CAM signaling
cbor04518
Integrin signaling
cbor04519
Cadherin signaling
cbor04520
Adherens junction
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
cbor05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142084516 (VCL)
04518 Integrin signaling
142084516 (VCL)
04519 Cadherin signaling
142084516 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142084516 (VCL)
04520 Adherens junction
142084516 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142084516 (VCL)
04810 Regulation of actin cytoskeleton
142084516 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142084516 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142084516 (VCL)
04147 Exosome [BR:
cbor04147
]
142084516 (VCL)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142084516 (VCL)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142084516 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
142084516
NCBI-ProteinID:
XP_075011447
LinkDB
All DBs
Position
7
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR
QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGAEGEEHIRGIMAEARKVAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggcaaggccattccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagaa
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaaa
gtggagaatgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctaattgatggatcaagaggcatcctttctggaacatca
gacttacttctgacattcgatgaagcggaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgacagtggcggaagtagtagagactatggaggatttggtgacatac
acaaagaatctagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaactcatcaggaacatagggttatgctggtaaactccatgaataccgtgaaggag
ctattgcctgtacttatttcagctatgaagatttttgtaaccacgaaaaattctaaaagc
cagggaatagaagaggcattgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataatccgtgtattacaactcacttcctgggatgaagatgcctgggcaagc
aaggacactgaagccatgaaaagagctttagccttaatagattcaaagatgaaccaggca
aaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaagcaataagg
cagatccttgatgaagctggaaaagcaggagaactgtgtgcaggcaaagaacgcagagag
attctgggaacatgtaaaacgctgggccagatgactgatcaactggctgacctcagagct
agaggacagggtgctacacccatggctatgcagaaagcgcagcaggtctcacaaggtctg
gatttgctcactgcaaaagtggagaatgcagcccgcaaattggaggccatgacaaactct
aagcaggcaattgctaagaagattgatgctgctcagaattggcttgcggatcctaatggg
ggcgctgaaggagaagaacatattcgaggaattatggctgaagcaaggaaagttgcggaa
ttatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctctgct
ttgacggctaagttgtcagatctgcggcgacatgggaaaggtgactctcctgaggcccgt
gcgttggctaaacaaatagctacatcgcttcagaatttacagtccaaaacaaacagggct
gtagcaaatactaggccagttaaagcagctgtccatttggagggcaagattgagcaagct
cagaggtggatagacaatcctacagttgctgatcggggagtaggccaggcggcaattcgg
ggtctggttgcagaaggtcgtcgtttagccaatgttatgatgggaccttatcgtcaagac
ctgcttgccaaatgtgaccgtgtagaccagctggctgctcagctagctgaccttgcagca
agaggggagggagaatctcctcaggccagggcaattgctgctcagcttcaagactcactg
aaggatcttaaaacacggatgcaagaggcaatgacccaagaggtttctgatgtttttagt
gacaccacaactcctattaaattgttagcagtagcagccactgctccttctgatgctcct
aatagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctagactg
ggagctacagcagaaaaagcagctgcagttggaactgcgaataaaactactgtggagggc
attcaagcaacagtgaaatcagcaagggaacttaccccacaggtagtatcagctgctcgt
atcctcctgagaaatcctggaaatcaagctgcttatgaacattttgagaccatgaaaaac
caatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatactaaa
tctctgttggatgcatcagaagaggctattaagaaagaccttgataaatgtaaagttgcg
atggccaatattcaacctcagatgctggtagctggtgccaccagcattgctagacgagca
aaccgcatcctactggtagcaaaacgggaggttgaaaattcagaagaccctaaattccgt
gaggctgttaaagcagcctctgatgagctaagcaaaactatatcaccaatggtaatggat
gctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagtttcttggattct
ggatacagaattctgggagctgtggccaaagtcagagaagcctttcagcctcaggaacca
gattttccccctcctcctcctgaccttgagcagcttcatctgactgatgagcttgctcct
ccaaaaccaccacttccagaaggtgaggttcccccgcccagaccaccaccacctgaagaa
aaggatgaagagttcccagagcagaaagcaggagaagctattaatcagcccatgatgatg
gctgctaggcagttgcatgatgaagcccggaagtggtctagcaagggtaatgacatcatt
gctgctgctaaacgaatggcactgctaatggcagagatgtcgcgcctggtgagaggaggt
agtggaaacaagcgtgctcttattcagtgtgcaaaagatattgctaaggcatcagatgaa
gtaactcgattggccaaagaggtggcgaagcagtgcaccgacaagcgcatcagaacaaac
ctcttgcaggtctgtgagcgaatcccaaccatcagtacgcaactcaaaattctttctact
gtcaaagctaccatgctgggcagaactaatatcagcgatgaagagtcggaacaggcaact
gagatgttggttcataatgcccagaatctcatgcagtctgtgaaggaaactgtgagagaa
gctgaagcagcatctattaagataagaacagatgctggattcactcttcgctgggtcaga
aagaccccatggtatcagtaa
DBGET
integrated database retrieval system
