KEGG   Calonectris borealis (Cory's shearwater): 142084870
Entry
142084870         CDS       T11211                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbor03036]
    142084870 (KDM4A)
Enzymes [BR:cbor01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     142084870 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     142084870 (KDM4A)
Chromosome and associated proteins [BR:cbor03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    142084870 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 142084870
NCBI-ProteinID: XP_075012090
LinkDB
Position
8
AA seq 1059 aa
MASELESLNPSARIMTFRPTMEQFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRRCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKNGKQCAEEMETGETCKEEVAGDETKSIPKHRIGTKRHRVCLEVPQEVSESDAFPKEE
LSSTQYEADMAEPHEGPTSELVQQGEQGLKLPDRVDSAKFEELKTVKLEEEEGQEQEAAA
LDLSISHSSNSTSVLTTSKQSAASSVQPSSPAYSGSSDSESTDLLAKRTLPGPAGVLTVH
SYARGDASGSDNEQTSGKKASVTASVNEQELAEVAKEYLRSMKESKKSKGRRQPLSKLPR
HHPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQS
PYCAVCMLFQTYQAECGGNSQNSGVTPAAVDGKIRTKPLIPEMCFTTTGCSTDLNLSTPY
LEEDGTSVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQ
RANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQ
CSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIV
ISKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQV
RWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMR
FTEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaaccccagcgcgcggatcatgaccttccgccccacc
atggagcagttccgggacttcagccggtacatcgcctacgtggagtcgcagggcgcccac
cgcgccgggctggccaagatagttcctccgaaggagtggaagccgcggcggtgctacgat
gacatcgacgagctcgtcatcccagcgcccatccagcaggtggtgacggggcagtccggc
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttcagaaggatc
gccaacagcgacaagtactgcacacctcgctacacggactttgaagaccttgaacgaaaa
tactggaagaaccttacgttcaatgcccctatctatggtgctgatgttaatggcacactt
tatgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctggatattgtg
gagaatgaaagcggcataaccattgaaggagtgaacactccttacctatattttggcatg
tggaaaacttcctttgcttggcataccgaggacatggatctctacagtattaattacttg
cattttggggaacccaagtcatggtactctatccctccagagcatgggaagcgactggag
agacttgcaaaaggtttctttccaggaagtgctcaaagctgtgaagcatttctccgtcac
aagatgaccctcatctctccatcaattctgaagaaatacggcatcccatttgataaggtt
acacaggaggctggagagttcatgataacctttccttatagctatcatgctggctttaat
catggctttaactgtgctgaatctaccaactttgctactcttcggtggatcgagtacggg
aagcagtctgtactgtgctcgtgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtatcagccagatcgttacaagctttggaaagccgggaaagacgtgactgtc
attgaccatgctcttccaaccccagaggcggcagagttcctaaaaggggatctcatgcaa
aaagtcaagaatgggaaacagtgtgctgaagaaatggaaacaggagagacttgtaaagag
gaggtggctggggatgagacaaaaagcatccccaagcatcgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagcgacgccttccccaaggaggag
ctgagctccacgcagtatgaagcagacatggcagagcctcatgagggacctacgagtgaa
cttgttcagcaaggtgaacaagggctcaagcttccagatcgtgtggactccgccaaattt
gaagaactgaaaacggtgaagcttgaggaggaagaagggcaagagcaagaagcagctgca
ttggatctctcaatttcacattcttcaaattccacttcagttttgacgacttcgaagcag
agtgcagcttccagcgttcagcccagctcgcctgcgtattctggttcttctgactctgaa
tcgactgatctgttggcaaaacgaactcttcctgggccagctggggtgctcacagtccat
agctatgctagaggggatgccagcggatctgacaatgaacagacttcaggaaagaaagcc
agcgtcaccgccagtgtgaatgagcaagaactggcagaggtagcaaaggaatacttaaga
tcaatgaaggagagtaagaagtccaagggtcgtcgccaaccattgagcaagcttccacgc
catcacccgctcttggttaaagactgcattagtgatgatgaggcatcagagcaactaact
cctgaagaagaggctgaggaaacagaagcatgggccaagccacttagccagctgtggcag
aatcggccaccaaattttgaggctgaaaaagaatacaatcggaccatggctcagcagtct
ccttactgcgctgtttgtatgctcttccagacgtatcaggcagagtgtggaggcaacagt
caaaactctggagtaactccagctgctgtggatgggaagatccgaactaaacccctgatt
cctgaaatgtgctttactacaactggctgcagcactgacctcaatctttcaaccccctac
ttagaggaagatggaaccagcgtactcatcacctgcaagaactgccatgtctgtgttcat
gcaagttgttatggtgtatcccctgacaaggccactgaagactggatgtgctccaggtgt
acagaaaatgccttagaagaggactgctgtttgtgttcattacgaggaggagcactgcag
agagccaatgatgacaagtgggttcatgtgatgtgtgctgtagctgtactggaggcaaaa
tttgtgaatattgcagagcggagtcctgtagatgttggcaaaatccccctgcaacgtttc
agactgaaatgcatcttctgcaagaaaagaagaaagagaattgcaggttgctgcgtacag
tgctcacacggtcggtgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtc
atgatgcagcctgatgactggccgtttgttgtcttcattacctgcttcaggcataagatt
ccatctcaggcagagagagctaaggctgcacttcaggatctgtcacctggacagatagtc
atcagcaagcacaagaatggtcgcttctatcagtgtgaagtggtcagcctcgcaaaggag
actttctacgaggtcaacttcgatgatggttccttcagtgataacctgtatccagaggac
attgtgagtcgagactgtcttcagttaggtccccctgctgaaggagaagttgtgcaagtg
agatggacagatggacaagtttatggagccaagtttgtagcatcacatgccatccagatg
taccaggtggaatttgaagatgggtcacagctgatggtgaaaagggatgatgtgtatact
cttgaagaggagcttcctaagagagtgaagtcaaggctgtcaatagcttcagatatgcgc
ttcacggagatcttcgcagagaaggaggtcagacaagagaggaagaggcaaagggtgatc
aattcacgctaccgtgaagattacattgaacctgcgttgtaccgggccatcatggagtaa

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