Calonectris borealis (Cory's shearwater): 142084952
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Entry
142084952 CDS
T11211
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142084952 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142084952 (RPAP2)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142084952 (RPAP2)
Protein phosphatases and associated proteins [BR:
cbor01009
]
HAD phosphatases
Fcp/Scp phosphatases
142084952 (RPAP2)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
142084952 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Interferon
CENP-X
Motif
Other DBs
NCBI-GeneID:
142084952
NCBI-ProteinID:
XP_075012371
LinkDB
All DBs
Position
8:19325918..19379093
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AA seq
612 aa
AA seq
DB search
MMAAGKPRGGAKGKPSRRRAGNKHSAALKNEDATQRKAALEAAMRKKIEFEKKALYIVEQ
LLEENITEEFLLNSGKFITPSHYKDIVDERSIIKLCGYPLCQNKLENVPKQKYRISTKTN
RVYDITERKCFCSNFCYRASKYFEAQISKSPVWMRDEEKPPDIELLKEGQSGQSGEEVKL
CDEIIKASDIENPRISSNPCESGSHDTASDSSSDTEQEFVSSVLPGSQSSSANFAQQLHR
NSILKKKHAQKVYSSSKTADSDVIEATERLSNCTLDAQEEMCACSVHNKITAKPSKNTTL
GKSSASENYENTYSGSQIVFLGVSKRGAEHLKRTLAHSKEHKKTELRDPVNSKGSLLEVL
KQTLMEWRTEETLKFLYGPSYTSLCSSECVSSANQENEELDEDDLDTADDLNTVAAGESE
NSLNYSLPFTSPGGIVPSYEKLKEETEFLELRVKEFYKGKCILAEEAVAHAQAEERQSKD
KDDQQEDLTFPLVDSNAQMQIRKRIVLEKLRKVLPAVLGPLQITRGDVYTELKNLVKTFR
LTNRNIIHKMPEWTLIAIVLLSVLSQITPLFKNTQTSPMYTQFLTTLLEELHFKNEDLES
LTRIFRKNCLLE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccgggaagccgcggggcggtgcgaaggggaagcccagccggcggcgcgca
ggaaataaacattcagctgctctgaagaatgaagatgctactcaaaggaaagcagctctg
gaggctgctatgagaaaaaagattgaatttgagaaaaaagcgttgtatattgttgaacaa
ctcctggaagagaacattactgaagagttccttctgaattctggaaaatttattactcca
tctcactataaagacattgttgatgaacggtctatcatcaaactatgtggttatcctcta
tgtcaaaataaactagaaaatgtgccaaaacagaagtacagaatttcaacaaaaacaaac
agagtttatgatatcactgaaagaaagtgcttttgcagcaacttttgctatagagcatct
aaatattttgaagctcaaatttccaaaagtccagtatggatgcgagacgaagaaaaacca
ccagacatagagctgctgaaggagggacagagtggacagtctggagaagaggtgaaacta
tgtgatgaaataattaaagcttctgacattgaaaatcctaggatatcttcaaatccatgt
gaatctggttctcatgacacagccagtgacagtagtagtgatactgaacaagaatttgtt
tcttctgtcctaccaggaagtcagtcaagttcagccaattttgcacagcaattgcacaga
aacagcatcctcaaaaagaagcatgctcagaaagtctattccagctctaaaactgcagat
tcagatgtgatagaagccactgaacgactatctaattgtacattagatgctcaggaagaa
atgtgtgcttgctctgttcataacaaaataactgcaaagccttccaaaaatactactcta
ggaaaatcaagtgcttcagaaaactatgaaaacacctatagtggttcacagatagttttt
ctaggtgtgagcaaaagaggggcagaacatcttaaaagaacactagctcattcaaaagaa
cataaaaaaactgaactgagggatccagttaattccaaaggcagtttattagaagtgctt
aagcaaacacttatggaatggagaactgaggaaactttaaaatttctctatggcccaagc
tacacttctttatgctcatcagaatgtgtatcatctgccaaccaggagaatgaagaactt
gatgaggatgacttagatacagctgatgatcttaacactgttgctgcaggggagtctgaa
aacagtttgaactattctttacctttcacaagcccaggtggaatagtgcctagttatgaa
aagttaaaagaagaaacagagttcctagaactccgagtaaaagagttctataaaggaaag
tgcatcttggctgaagaggcagtggcacatgcacaagcagaggaacgtcaaagcaaagac
aaagatgatcaacaggaagatctcactttcccacttgttgattcaaatgcacaaatgcag
attagaaagcgaatcgtccttgaaaaactgagaaaagtattacctgcagttttgggccct
cttcagattactcgaggtgatgtttacacagagctaaaaaatcttgtcaaaactttccgg
ttaacaaacagaaatattattcacaaaatgcctgaatggactctaattgctattgttttg
ttatctgtattgtcacaaattactccacttttcaagaatactcagacgagcccaatgtac
acacagttcctgactacgttgctggaagaactgcatttcaaaaatgaagatctggaaagt
ttaacaagaatatttaggaagaactgcctacttgaatga
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