Calonectris borealis (Cory's shearwater): 142085060
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Entry
142085060 CDS
T11211
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142085060 (PRDM4)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
142085060 (PRDM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
zf-C2H2_16
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
Zn_ribbon_Com
DUF7838
Motif
Other DBs
NCBI-GeneID:
142085060
NCBI-ProteinID:
XP_075012678
LinkDB
All DBs
Position
1
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AA seq
800 aa
AA seq
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MHPRMNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVSSNPSALDPYQPSGTVGLEPGIVSMDSRTVNTHGPQNLHP
SDSHEVALDTTITMESVSRVTSPISTDGMTEELTMDDVAGDHSQIPNGSRSHEPLAVDTV
GSNLTSDAVGHGGVIPIHGSTLELPVVMEPDHIAGRVTGISDSTLNDSIHTVAMSTNSVS
VALSTSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPSHVDVSADNLAFVPSSLQME
DSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
MGAEAGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYARQLGVPE
HPDVHICHCGKECASYADFKAHLSSHIHNHLPSQGHSSSHGPGHGKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELIDSMRT
EDCRINNGVYSTGDALSGHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctca
tcctctgtgagcaatgccctgccggtctccgggagtcacttgggattggcagcgtcaccc
actcacaatgccataccagcaccaggcttgcctgttgcaattccaaacttgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggggatcgagga
gtgatgtgtggtctaccagagagaaactacaccctacctccgccaccataccctcacctg
gagagcagctatttcagacacattctacctggtatcttatcttacttggctgacagacct
ccacctcagtacatccatcccaacactataaatgttgatagcaatccggcattgtcagtc
tccagcaatccctcggccctagatccctaccagcccagtggaaccgtggggctggaacca
gggattgtctccatggactcccgcacagtgaacactcatggtcctcaaaatctgcatcct
agtgacagccacgaggtagcgctggatactacaatcactatggagagcgtttcgagggtc
accagccccatctctacagatgggatgacagaggagcttacgatggatgacgtagccggg
gatcattcgcagatcccaaatggctcccggagccatgaacctttagccgtagacacggtg
gggagtaacttgacatcagacgctgtgggacatggcggtgtcattcccattcacggtagc
actttggaactccctgttgtcatggagcccgaccacatcgctgggcgggtgacaggaata
tcggacagcacactaaatgactccattcatactgtggccatgagcaccaactctgtgagt
gtggcgctctctacctcacacaacctagcttccctggactcggtagccttgcatgaagtg
ggcctcagcctcgagccggtggcagtgtcttccataaatcaggaagtagcgatggggcca
agtcatgtggatgtgtctgcagacaatcttgccttcgtaccatcctctctgcaaatggaa
gactccaattcgaacaaggagaacatggcaaccttgtttaccatatggtgcacactgtgt
gacaaggcatatccatcggattgcccagatcacgggcccgtcacctttgtccctgacacc
ccgatagagagccgagccaggctttctctccctaagcagcttgtcctccggcagtctatc
atgggagctgaagcaggtgtgtggacacgagaaaccattcctgtaaggacttgttttgga
cctttgatcgggcagcagagccattctctggaggtggctgactggacagacaaagcagct
agtcacatctggaagatctaccacaatggcgtcctggagttctgcatcattacaactgat
gaaaatgaatgtaactggatgatgtttgtacgcaaagccaggaaccgtgaagagcagaat
ctggtagcttatcctcacgatggaaaaatttacttttgcacctctcgggacatcccacct
gaacatgagcttctcttttattacagtcgggactatgcacgacagcttggtgtccctgaa
catccggacgtgcacatctgccactgcggaaaggaatgcgcttcctatgcggacttcaag
gcccatttgagcagccatattcacaaccacctccccagtcaggggcacagcagcagccat
gggccaggccatggcaaggagaggaagtggaagtgctccatgtgtccccaggctttcatc
tcaccttccaagctccacgtccacttcatggggcacatgggcatgaagccacataagtgc
gatttctgtagcaaagctttcagtgatcctagcaacttacggacacacctcaagatacac
acaggtcagaagaattatcgctgtaccctctgcgacaaatcgttcacccagaaggctcac
ctggaatcgcacatggtcatccacacaggggagaagaatctgaagtgcgattactgtgaa
aagcttttcatgcggaggcaggacctcaagcagcatgtactcactcacacgcaagaacgg
cagatcaagtgccccaagtgtgacaagctgtttctgaggacaaatcacctgaagaagcat
ctcaattcacatgaaggaaagagggactatgtctgtgaaaaatgctccaaggcttatcta
accaaatatcacctcactcgccacttaaaaatatgtaaaggccccacatccagcctgtca
gccccagaggaggaagaggaggaggattcagaggaggaattaatagactctatgaggact
gaagactgtaggattaacaatggagtctattcaacaggtgatgccctctctggacacaaa
tga
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