Calonectris borealis (Cory's shearwater): 142085171
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Entry
142085171 CDS
T11211
Symbol
LAMC2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04382
Cornified envelope formation
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142085171 (LAMC2)
04518 Integrin signaling
142085171 (LAMC2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142085171 (LAMC2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142085171 (LAMC2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
CCDC39
Motif
Other DBs
NCBI-GeneID:
142085171
NCBI-ProteinID:
XP_075013040
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Position
8:33856489..33875011
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AA seq
1176 aa
AA seq
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MAGCWLLPLCCLAASLLPAAPSANRGEVCDCNGMSRQCIFDWHLLRETGNGYRCLGCLGN
TAGAHCERCKEGFFRRREEDCCLPCRCHPQGALSPQCDSDGRCSCKPGVMGKKCDQCQPG
FESLSEAGCRRNGQSPRCECDPAGSAGGCLSGRCVCKASATGERCERCKRNFYNLEARNP
AGCSPCFCYGHSAACVSADNHSVYNITSTFQQGAEGWRGVHESGSPAQLQWSPRHRDAFI
AARSSEPIYFVAPAKFLGNQQLSYGQTLSFDYRLDRGGRQPSPHDVVLEGDGLRVTAPFL
PQGKVLPCGVSQTYTFRLDEHLSSKWSPRLNHFEYRRLLGNLTALWIRATFGEYSTGYID
NVTLVSAQPVAGVPAPWVELCECPAGYRGQFCERCAPGYRRDVPGWGPFSICVPCNCQGG
GICDPDTGECYSGDENVGNSISCPFGFYRDPRQPHGCRTCPCSNGQGCSVVPGGEEVICD
RCPPGAAGANCEYCADGYFGDPAASRPCQPCRCNGNVEPNAVGNCDRRTGECLKCIYNTA
GFYCDRCKDGFFGNPLAPDPADKCRACACDSAGAEPLKCGSDGSCICKPGFEGPSCEESE
CPACYGQVKAQVDLYLQQLVELELLFSEVQAGGGAESQQLEGRMQLAEEMLRTILGEALS
LQASDRSLESRVARMKGQGSSSRSRLDEIKATAERLRSLGSRYERQVQDTRQLLERARLD
LDRSGAALRRVTIPVSNLPGGSNQFLMLAQEALRLANSHAQAANTIEQAAKAAREDARQA
LELVRAAGGGEAAASGSLRGLLGKYEELKTLAGGLKAEADGMASEADKAYQGSLVLLSSL
SRLTKTDIGSFEGEATRLKQDASAFLSLVDTYMAQHRQLQSRTGRWEEEIKQLMRRGEGE
RATLTQLLSRANLARSTALQAVSAGNATFYEVEQILKSLREFNLQADDKRREAEDAMRRL
PIISSMVASAREKTDRAEVILGSAASQSKAASSAAGEAKEITMGIQQEITRLKVEANKTA
DGVLALEKAVAALQREAKEVDGEFERKLSEVEADAAVIQETAQEAQRVHAKAGRAGVVVQ
ETLSALEELLRLMNQPGAVDEDGLKQLEMNFSKAKTRSNQLKDEMSELEQTAALQKTRVR
TLESSIDEILADIKNLEDIQKNLPPGCYNTKAIELP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtgctggctcctgcccctctgctgcctcgcggcgtctctcctgcccgcagcc
ccgagcgccaacagaggagaagtctgtgactgcaacgggatgtccaggcagtgcatcttc
gactggcacctcctgagggagacggggaacggctaccgctgcctcggctgcctgggcaac
acggcgggcgcccactgcgagcgctgcaaggagggcttcttccgccggcgggaggaggac
tgctgcctgccctgccgctgccacccccagggcgccctcagcccgcagtgcgacagcgac
ggccggtgcagctgcaaacccggcgtgatgggcaagaagtgcgaccagtgccagccgggc
ttcgagtccctctccgaggccgggtgccggaggaacgggcagagcccacggtgtgagtgc
gacccggctggcagcgcggggggctgcctctccggccgctgtgtctgcaaggcgagcgct
accggagagcggtgcgagaggtgcaagcgaaacttctataacttggaagccagaaacccc
gcgggatgctcgccctgcttttgctacgggcactcggctgcgtgtgtcagcgcagacaac
cacagcgtctacaacatcacctccaccttccagcaaggtgcagaaggttggcgaggtgtc
catgaaagtggctccccagcccagctccagtggtccccacgccatcgggatgccttcata
gcggcgaggagttcggagccgatatactttgtggcacctgcgaaattccttgggaaccag
cagctgagctacggccagacgctctccttcgattaccgcctggaccgagggggacgccag
ccatctccgcacgatgtggtcctggaaggagatggcctgagagtcactgcccccttcttg
ccccagggcaaggtcctgccctgcggcgtcagccagacgtacacgttcaggttggacgag
cacctgagcagcaagtggagcccaaggctgaatcactttgaatatcgcaggctgctggga
aacctgacagctctctggatccgagccacctttggggagtacagcaccggctacatcgac
aacgtcaccctggtgtcggcgcagcccgtcgccggagtccccgctccctgggtggagctc
tgcgagtgcccggcggggtaccgggggcagttctgcgagaggtgtgcccctggctaccgc
agagatgtccccggctgggggcccttcagcatctgcgtgccgtgcaattgccagggggga
ggaatttgtgaccccgacaccggcgaatgttactcgggagacgaaaacgtgggcaatagt
atcagctgcccctttggcttctaccgagacccccggcagccgcacggctgcaggacatgc
ccctgcagcaacggccaaggctgctcggtggtgccgggtggcgaggaggtcatctgcgac
cgctgccctccaggagctgccggggccaactgcgagtactgtgccgacggctattttgga
gacccagcggcttcccggccctgccagccatgccggtgcaacggcaacgtggagcccaac
gccgtggggaactgcgaccgccggacgggcgagtgcctcaagtgcatctacaacaccgcc
ggcttctactgcgaccgctgcaaagacggcttcttcgggaaccccctggcccctgatcct
gccgacaagtgcagagcctgcgcctgcgactcggctggtgccgagcccctgaagtgtggg
agcgatgggagctgcatctgcaagcccggcttcgagggtcccagctgcgaagagagcgag
tgcccggcttgctatggccaggtgaaagcccaggtggacctgtacctgcagcagctggtg
gagctggagctgctgttctcagaggtgcaagctggcggtggggccgagagccagcagctg
gaggggaggatgcagctggccgaggagatgctgcggactatcctcggggaagccctgagc
ctgcaagcctctgacaggtctctggaaagccgcgtggccaggatgaaggggcaagggtcc
agctcccggagccgcctggatgagatcaaggcaacggcggagaggctgaggtctctcggg
agccggtatgagaggcaggtgcaggacacccggcagctgctggagagagccaggctggac
ctggaccgcagcggagccgctttgcgtcgggtgaccattcccgtttcaaaccttcccggg
ggctcgaatcagttcttgatgctggcccaggaggctctgaggctggccaacagccacgcg
caagccgccaacaccatcgagcaagccgcgaaggcggcgcgggaggacgcgcggcaggcg
ttggagctggtgcgcgcggccggcgggggagaggcggccgcctccggctccctgcgaggg
ctgctcgggaagtacgaggagctgaagacgctggctggaggcctgaaggctgaggccgac
gggatggcctccgaggcagacaaggcttatcagggcagtctggtgctcctcagctccctg
tcccgcctgacgaagaccgacatcgggtcctttgagggggaggcgacccggctgaagcag
gatgccagcgctttcctgagcctggtggacacctacatggcacagcacaggcagctgcag
agccgcacggggcgctgggaggaagaaatcaagcagctgatgcgaaggggagagggcgag
agagcgacgctgacacagctgctgtcccgagccaacctcgccaggagcacagccctgcaa
gccgtgagtgctggcaacgccaccttctacgaggtggaacagatcctgaagagcctccgg
gagtttaacctgcaagcagatgacaagagaagggaagctgaagatgccatgaggaggtta
ccaattatcagcagcatggtcgcaagtgccagggagaagacggaccgagctgaagtcatc
ctgggcagcgccgcttcccaatccaaagcagccagcagcgcggcgggggaagcaaaggag
atcaccatggggatccagcaggagattacgcgactgaaagtggaagccaacaagacggct
gatggcgtcctcgccctggagaaggcagtggccgccctgcagcgtgaggccaaggaagtg
gatggtgaatttgagaggaagctctcggaggttgaggcggatgctgctgtgatacaggag
acagctcaggaagctcagagggtccacgccaaggctggccgggcaggggtggtcgtgcag
gagacgttgagtgccttggaagagctgctgcgtctgatgaaccagcctggtgccgtggat
gaggatggcctgaagcagctcgagatgaattttagcaaagccaaaaccagaagcaaccag
ctgaaggatgagatgtcggagctggagcagacagccgccctgcagaagacccgagtgcgg
acgttggagagcagcattgatgagatcttggcagatattaagaacctggaggatatccag
aagaatcttcctccaggctgctacaacacaaaagccattgaattgccgtga
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