Calonectris borealis (Cory's shearwater): 142085210
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Entry
142085210 CDS
T11211
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
142085210 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142085210 (ABCA4)
Transporters [BR:
cbor02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
142085210 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142085210
NCBI-ProteinID:
XP_075013100
LinkDB
All DBs
Position
8:complement(19883834..19957692)
Genome browser
AA seq
2276 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLSLFLALVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGESPGVVSNYNNSILARVYKDAQELLLEAPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLEDAGLPDIVVFQ
LINAQVRPEQFAYGVPSLTLKDIACSQMLLDRFIIFSSRRGLPSVHKAMCALSQENLQRV
EDALYANVDFFKLFQLLPTVLDRNSPGADLKAWGRVLSNVSKAVQKLARKPSVQDLLMVL
QPFVQDRRPESLGHLMSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIESTKKKSSY
LYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVRQILKNANSTFEE
LERLRLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVREFLNSQLGAEGLTAEYIIN
FLHNGSPGSREKGMADFDWRNIFSAADQALRLLRQYLECLTLDKFEGYLDETQLTHQALR
LLEENKFWAGVVFPDIEPTTSSLPPLVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTNTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFVMMAVSTFLLTALIM
CGQVLHYSSPLLFFLFLLTFTTATIMQCFLFSTLFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRMTVNLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
KMMLFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVQESYWLESEGCVDQKAVEGEEKESR
TKKSEEPEKPEEKINTFFEPEPTGLIPGVCIQNLVKIFANRPKPAVDGMNITFYEGQITA
FLGHNGAGKTTTMSIMTGLFPPTSGTVLIGGLDIQTHMDSIRQRLGMCPQYNILFNHLTV
AEHILFYSQLKGRSRDEAEQELETMLEDTGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRVAIISQGKLFC
SGSPVFLKNCFGSGFYLTLVRKLKNTRIGRAASLCSCGSQCSCSCSSCAHRDKEGDPEQE
LDGDLNELAEVIHHHIPEAKLIESIGQELIYLLPNKHFKQRSYASLFRELEETLDDLGLS
SFGVSDTPLEEVFLKVTAEADPGMQKAGDTQENGSTLGKTSTENKPGEQTALKTNDTSRM
PVGIAGDQNEGKGSQQYKGFQLVRQQIKALLIKRFHHASRSHKDFLAQIVLPASFVLLSL
ILTVIIPPFGEYPALTLHPWIYGQQFTFFSNERPGSEQMVSLTDAFLNKPGFGNRCMKNQ
PLQNHPCNSMPTAWNTPAVHPNLSSLLLSQKWSPENPSPSCKCSTHKKLTMLPECPAGAG
GLPPPQRVQHSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGKLP
VLHVSGDQVVNFLSDLGRMMNMTGGQASLAAAKEISNFLKYMETEDNIKVWFNNKGWHAM
VSFLNVANNAILRANLRTGQAPEEYGITAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVI
FAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPAIYWLTNFLWDIVNYALSAGMVVVIFT
GFNKKAYTSPTNLPVLVALLLLYGWAVIPMMYPASSFFSVPSTAYVALSCINLFVGINSS
AITFILELFENNPSLLKFNKTLKNVLIVFPHFCLGRGLIDLAMNQAVTEVYARFGEEHVS
NPFQWDFVGKNLVAMAVQGVAFFVLNLLMQHRVFSTRWFAETAMSPIIGEDEDVAEERKR
ILNGGNKTDILELKELTKIYAGRHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTG
DTDVTSGDAVVAGNSILTHISNVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEI
KRVAEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRR
LLWDSIVSVLRDGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIV
TLKIKAPKSGLPPDPAPAEQFIRMNFPGCLQREKHYNMLQYQICSSSLAKIFRLIISNKE
NLHIEEYSISQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREAKVSPALHQQAIA
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttaggcaagtcagacttctactctggaagaattggatcctccggaaaaga
caaaagcttcgttttctggtggagcttgtatggcctctgtcattatttcttgcccttgtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatctgcaggaacactgccatggttacatggcatcttctgtaacatgaacaacccc
tgtttccgtagcccaacccatggagagagtccaggtgttgtgtccaactacaacaattcc
atccttgcaagagtatataaagatgctcaggaactcttactggaagcccctgaaattcat
gaccttggcagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagactctcacttccttcttgctggaagatgctggcctcccagacattgtcgttttccag
cttattaatgctcaagtgcgccctgaacagtttgcctacggtgtccctagcttgactctg
aaggacattgcttgcagtcagatgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtgcacaaggccatgtgtgctttgtcccaggaaaacctacagagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcagctgcttcccactgtg
ttggacagaaactcgccaggtgctgacctgaaggcctgggggagggtgctgtctaatgtc
tccaaagcagtgcaaaagctagccaggaagccaagtgttcaggaccttttgatggttctg
caaccatttgtacaagacagaaggccagaatccttaggccacctcatgagttccctgtct
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataataactacaaagctttcctggggattgagtcaacaaagaagaaatccagttat
ctttatgataatacgaccacgcccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacggcaaatcctaaaaaatgcaaactccacttttgaggaa
cttgaacgcctcagactgttgaccaaagcttgggaagaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcaccctacagtg
agggagttcttaaacagccaactgggtgctgaaggcttaaccgctgaatacataatcaac
tttctccacaatgggtctccagggagccgggagaagggaatggcagactttgactggcgg
aacatcttcagtgctgcagaccaagctctgcgtttgctcaggcagtatctggagtgcttg
accttggataaatttgaaggttatcttgatgaaactcaactgactcatcaagcccttcgt
ctgctggaggaaaacaaattctgggctggtgttgtttttccagacatagagcctacaacc
agcagtcttccacctcttgtgaagtacaagatccggatggacatagatgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttacgttatatctggggaggctttgcatatctccaagacatgattgagcatgggattata
aagacccagaccaacactgaagtgccattaggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctagcttggatatactcagtttccatgactgtgaagagtatagtgctggagaaggaaatg
cgtctgaaagaggctatgaagaacaggggtataactaatggggtgatttggtgcacttgg
ttcctagacagcttcgtcatgatggctgtgagcacgttcctcctcacagcactgattatg
tgcggacaagtactacattatagcagtccacttctcttctttctattcctattgacattc
accacggccaccataatgcagtgtttcttattcagcaccctcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtatctgcctcatattgtctgcttt
gtctggcaagaccgcatgactgttaatctgaagattctagcaagtttgctttctcaggta
gcttttggtttcggtacagaatacttgtcacgctatgaagagcaaggtcttggcctacaa
tggggtaacatcagaaccagtcccttggaaggagatgaatatagttttcttttttccatt
aaaatgatgctttttgatgcttttctgtatggaatactttcttggtatcttgacaatgtt
tttccaggggactatgggctaccacagccttggtatttccctgtgcaggaatcttactgg
cttgagtcagaaggctgtgtggatcagaaggccgtggaaggggaagaaaaagaaagcaga
acaaagaaatctgaagaacctgaaaagccagaagaaaagataaataccttctttgagccc
gagccaacaggattgattccaggagtatgcattcagaacctggtgaagatttttgcgaac
aggcccaagccagcagtagatgggatgaatattactttttatgagggccagatcacagcc
ttccttggtcacaatggagcaggaaagacaaccaccatgtcgataatgacaggcctcttc
ccacccacctctggaactgtgctgattggcggcctggatattcagactcacatggactcc
attcggcagagattaggcatgtgccctcagtacaacatcttattcaatcaccttactgta
gcagagcacatcttgttttattctcaactgaaagggagatccagggatgaagctgagcaa
gagttggaaacaatgctagaagacacgggcctcacccataaaaggaatgaagaggctcag
aatttgtcaggtggaatgcagaggaaactgtctgttgccattgcttttgtgggtgaagca
aaagtggtagtcttggatgagcccacttctggagttgatccgtattccaggcgatctatc
tgggatcttctgctgaagtatcgctcaggcagaaccatcatcctctcaacccatcacatg
gatgaggcagacatccttggagacagagtagccattatatcccaagggaaactcttctgc
tcaggctctcctgtattcctaaagaactgctttgggtctggcttctatcttactcttgtt
cgcaagctgaaaaacaccagaattggaagggctgcatcactttgtagctgtggatctcag
tgctcctgctcctgctccagctgtgcacacagggacaaagaaggagatccagagcaggaa
ctggatggagatctgaatgaactagcagaagtaattcatcatcatatcccagaagcaaaa
ttaattgaaagtattggtcaggaactcatttaccttttgcccaataaacactttaaacag
cgatcttatgccagtctcttcagagaactggaggaaacattggatgacctgggactcagc
agttttggagtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagct
gaccctggaatgcaaaaagcaggagacactcaagaaaatggttctactcttggcaaaact
tctactgagaacaaaccaggtgaacaaaccgcactgaaaactaatgacacttctcgaatg
ccagtaggcatagcaggagaccaaaatgaaggcaaagggtcccaacagtataaaggtttt
cagcttgtacgtcagcagatcaaagcactgctcatcaaacggttccaccatgcctcccgc
agccacaaggacttcctagcccagattgttctccctgctagttttgtgttgctgtcttta
atacttacagtcattattcctccgtttggagaatatcccgccttaaccttacacccttgg
atctatggacaacagtttactttcttcagcaatgagcgtcccggcagtgagcagatggtc
tccctcactgatgctttcttgaataaaccaggattcggaaatcgctgcatgaagaatcag
cctcttcagaaccacccatgcaatagtatgccaactgcctggaacacacctgctgttcat
cctaacctaagcagcctcctgctgagccaaaagtggagccctgagaatccttcaccttcc
tgcaagtgcagcactcacaagaaactcactatgctgccagaatgccctgcaggtgcagga
ggcctcccgccaccacagagagtgcagcacagcacagaaattcttcaagatctgacccac
agaaatatttcagattttctcgtgaaaacatatcctactttgataaaagggagcttgaag
agcaaatactgggtcaatgaacaaagatatggaggaatttctataggaggaaagctccca
gtccttcatgtttctggagatcaagttgtcaattttttaagtgatcttggccgaatgatg
aatatgacaggaggacaagcttcactggctgctgctaaagaaatttctaatttccttaaa
tacatggaaactgaagataatattaaggtgtggtttaacaacaaaggctggcatgctatg
gttagtttccttaatgtagccaataatgcaatccttagagctaacttgcggactggccaa
gcccctgaggaatatgggatcactgctgtaaaccatcctctgaacctcactaaggagcaa
ctctctgaagtcactgtgctgaccacttcagtcgatgctgttgttgccatctgtgtgatt
tttgctatgtcctttataccagctagttttgttttatacctgattcaagaacgtgtaaca
aaagccaagcatctacagtttgtcagtggtgtgagccctgcaatctactggctgactaac
ttcctgtgggacatagtgaattatgcactgagtgctggaatggttgtggttatattcact
ggattcaacaagaaagcatacacttctccgactaatctccctgtgcttgttgccttgctg
cttctgtatggatgggcagtaattccgatgatgtaccctgcttcttctttcttcagtgtc
cctagcactgcttatgttgcattgtcttgtattaatctctttgtggggatcaacagcagt
gccattacattcatcctggagttatttgaaaataacccgtctttgctgaagtttaataaa
acgttgaaaaatgtgctgattgtgttcccacatttttgcctgggccgtggactcattgac
ttggccatgaaccaagctgtgactgaagtatatgccaggtttggtgaggagcatgtttcc
aatccttttcagtgggactttgttggaaagaacctggttgccatggctgttcaaggggtt
gcattcttcgttctgaatctccttatgcagcaccgtgtgttctccacaagatggtttgct
gagactgccatgtcacctattattggtgaagatgaggacgttgcagaagaaagaaaaaga
attttgaatggagggaacaaaacagatatcttagaattaaaagaactgaccaagatttat
gcaggtaggcacaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgc
tttggtcttttgggagtgaatggtgctggcaaaacaacaacgttcaaaatgctgactgga
gatactgatgtgacatctggagatgctgtagtggctggcaatagtatattgacccacatt
tctaatgtccatcaaaacatgggatactgccctcagtttgatgccattgatgacctgctc
acaggacgagaacatctctatttatatgcacgcctgcggggggttccagcagaggaaatt
aagagggttgctgaatggggcatccagaagctgggacttcctatgtatgcagaccacctg
gctggtacctacagcggtggcaacaagcgcaagctctccactgccattgcgctgataggc
tgcccaccactcgtcttgctagatgaaccgactaccggaatggaccctcagtcccggcgc
ctcctgtgggactctattgtcagtgtgctcagagatgggcgagctgtggttctaacctca
cacagtatggaagaatgtgaagccctctgtactcgtttagccatcatggtaaaaggtacc
ttcaaatgtctgggcacaattcagcagctgaaatacaagtttggagatggctacattgtc
actctgaaaatcaaagctccaaagtctgggctgcctccagatcctgctcctgctgagcaa
ttcatacgcatgaacttcccaggctgtttacaaagagagaaacactacaacatgctgcag
tatcagatttgctcctcctctctggctaagatttttcggttaataatctccaataaggaa
aacttgcatattgaagaatactctatctctcaaacaactttagatcaggtttttgtgaac
tttgctaaacagcagatggaggatgaagaaattcctttgcatccccgtgcagctggagcc
agccgagaagcaaaggtgtcccctgctttgcatcagcaggcaattgcatag
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integrated database retrieval system
