Calonectris borealis (Cory's shearwater): 142085259
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Entry
142085259 CDS
T11211
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbor03032
]
142085259 (PIF1)
03029 Mitochondrial biogenesis [BR:
cbor03029
]
142085259 (PIF1)
Enzymes [BR:
cbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
142085259 (PIF1)
DNA replication proteins [BR:
cbor03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
142085259 (PIF1)
Mitochondrial biogenesis [BR:
cbor03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
142085259 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Herpes_Helicase
Viral_helicase1
Mg_chelatase
ABC_tran
AAA_7
PhoH
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
142085259
NCBI-ProteinID:
XP_075013152
LinkDB
All DBs
Position
8:13286429..13293539
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AA seq
605 aa
AA seq
DB search
MEDAELRCTVAVEQPLPGGQAPRRRVMRGALVLLGRNELRQPVLRVVGGSGGAAALSFAL
AGDAVRLFTRFAGDGRAAVRVGPGGAQVLLSDCPPDALRRFLRLLRLKVAAGPRAAPRGP
RLLDRPPPAFAVISPLQERDLLRAPGRLRGGQARGERPAEVPRAERRPPARLSAEQEAVL
GAVRSGKSIFFTGCAGTGKSFLLKKIVGSLPPKSTYATASTGVAACHIGGTTLHAFAGIG
SGNAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDRLEAVARAVRKRDEPFGG
IQLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHVNMELTEVRRQTDKTFVSLLSAVR
LGRCTEEVTRLLMQTAANRSERDGILATRLCTHKDDVEITNERRLQQLSGEVRTFEALDS
DPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKGLPKVR
FLCGVTQVIKMEKWVFKGPSGFHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFES
GQAYVALSRARSLAGLRVLDFDPKVVRADPSVLQFYKQLRRHQLLTQDSLHTHSGADEKE
NWKCS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcggagctgcgctgcacggtggccgtggagcagccgctgccggggggacag
gccccgcggcgccgcgtgatgcggggcgcgctggtgctgctgggccgcaacgagctgcgg
cagccggtgctgcgggtggtcggcggtagcggcggggcggcggcgctaagcttcgccctg
gccggtgacgccgtgcggctcttcacgcggttcgcgggcgacgggcgggcggcggtgcgg
gtggggccgggcggcgcccaggtcctgctctccgactgccccccggacgcactgcgccgc
ttcctccgcctcctgcggctcaaggtcgccgccgggccgcgggccgcgccgcgtggcccc
cgcctgctggaccggccgccgccggccttcgccgtcatcagcccactgcaggagcgagac
ctgctgcgtgcccccggccgcctccgcggcggccaggcgcggggggagcgcccggcggag
gtgccgcgcgcggagaggcggcccccggcgaggctctcggcggagcaggaggcggtgctg
ggagccgtgcggagcgggaagagcatcttcttcaccggctgtgcagggactgggaagtcg
ttcctgctgaagaagatcgtgggctccctccctccgaagagcacctatgctacagccagc
acgggagtggcggcttgtcacatcggtggcaccactctccacgccttcgcagggatcggt
tctgggaacgccccgctggaacagtgtattcagctggcggagaggcctggggtgcgccag
cactggctggcctgccagcacttaattattgatgagatctcaatggtggatggcaagttc
tttgacaggctggaggcagtggcgagagcagtcagaaaacgggatgagccttttggagga
attcagctaattatctgtggggacttcttgcagctacccccagtctgcaaggctaacgaa
gaaaccaagttctgcttccaggcaaaaagctggaggaaatgcatccacgtaaacatggag
ctgactgaagtgcggagacagaccgacaagacctttgtctcactcttgagtgcagttcgt
ttaggcaggtgcaccgaggaggttaccagactgctgatgcagaccgctgctaacaggtct
gagcgtgatgggatcctggctacacggctctgcacccataaagatgatgtagaaataact
aatgagagacgtttgcaacagctatcaggagaagtgcgcacttttgaggctttggacagt
gacccaatgctagtgaagttaattgatgctcagtgtcctgtgggtggtagagttgagcta
aagcttggagctcaggtgatgctagctaagaatctggatgtgtctcaagggctggtgaat
ggggcacgaggagttgttgtaggatttgaaagtgaacagaaggggctgcctaaggtgagg
tttctctgtggggtcacacaggtcatcaaaatggagaaatgggtcttcaaaggaccatca
ggatttcatctgagtcgtcaacagttgcctttaaaattggcatgggccatttccattcac
aagagtcagggcatgtctttagattgtgtggaaatctccctgtctcgtgtctttgaaagt
gggcaggcttacgtagccctctcccgagcccgtagccttgcaggtctccgtgttctggat
tttgatccaaaagtagtgagagctgatccttctgtgttgcagttctataaacagctgaga
cgtcatcaacttctaacccaggattctctacacacccattcaggtgctgatgagaaggag
aactggaaatgcagctga
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