Calonectris borealis (Cory's shearwater): 142085408
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Entry
142085408 CDS
T11211
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03030
DNA replication
cbor03410
Base excision repair
cbor03420
Nucleotide excision repair
cbor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142085408 (RFC4)
03410 Base excision repair
142085408 (RFC4)
03420 Nucleotide excision repair
142085408 (RFC4)
03430 Mismatch repair
142085408 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbor03032
]
142085408 (RFC4)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142085408 (RFC4)
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142085408 (RFC4)
DNA replication proteins [BR:
cbor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
142085408 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
142085408 (RFC4)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
142085408 (RFC4)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
142085408 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
142085408 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
AAA_30
AAA_16
AAA_22
AAA_11
DUF815
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_19
AAA_5
TIP49_C
DNAX_ATPase_lid
AAA_7
ResIII
AAA_3
Motif
Other DBs
NCBI-GeneID:
142085408
NCBI-ProteinID:
XP_075013392
LinkDB
All DBs
Position
9:complement(19835059..19850594)
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKPPAAKERGAAGAAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEHVKISSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKETTDELLSVCQSGSFEKLETLAKNLINE
GYAVAQLVNQLHDTVVESEDYSDKQKSVIVEKLAEVDKCLADGADEYLQLMSLCALVMQQ
LTQNT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctcaaaggcccgtcatccatcagcaccaagccccccgctgccaaggag
aggggcgcggccggcgcagcggggagcagcggggagggcaagaggctcaaacccatcccc
tgggtggagaaatatcgccccaaaaatgtggatgaggtcgccttccaggatgaagttgtt
gctgtgctgaaaaagtccttggagggtgctgatcttcccaatctgttgttctatggccca
cctggaactggaaagacttccactattttagcagctgcaagagaactctatgggcctgaa
ttattccggcaaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgatt
cgggaaaaagtgaaggcttttgctcagctaactgcatctggaagccgttcagatggtaaa
gtttgtcctccttttaaaattgtaatcctggatgaagcagactcaatgacttcagctgcc
caggcagctttaagacgcacaatggaaaaagaatctaaaacaacgcgtttctgccttatt
tgtaactacatcagcagaataattgaacccttaacatctcgatgctccaaattccgcttc
aagcctttgtcagacaaaatccaacagcagaggctattggacgtttctgagaaggaacat
gtgaaaatcagtagtgaggcagtgtcttaccttgttaaagtgtcagaaggggacttaaga
aaagcaattacttttcttcaaagtgccactcgcctaatgggcgggaaagagatcacagag
aagatagtcactgaaattgctggggtcattcctaaagaaacaactgatgaactgctatct
gtctgccagagcggttcatttgagaaactggaaacactggcaaagaatctcataaatgaa
gggtatgctgttgctcagcttgtaaaccagctgcatgatactgttgttgagagcgaagat
tacagtgacaagcagaaatctgtcatagtggagaaacttgcggaagtagacaaatgcctg
gcagatggtgctgatgagtacttgcagttgatgagtctgtgtgcccttgtgatgcagcag
ctgacgcagaacacttaa
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integrated database retrieval system
