Calonectris borealis (Cory's shearwater): 142085475
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Entry
142085475 CDS
T11211
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142085475 (SMC4)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
142085475 (SMC4)
Condensin II
142085475 (SMC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
TPR_MLP1_2
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
142085475
NCBI-ProteinID:
XP_075013555
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All DBs
Position
9:complement(27445200..27487266)
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AA seq
1306 aa
AA seq
DB search
MEGEQPTETMPSKSTKTSTAAHRKGREPLEGSTSDMEVENEGDRQLGEVPPQAVSNEVLD
NRSLEEILGSISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGP
NGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCSVEVHFQKIIDKEGDD
YEVIPNSSFCVSRTAYRDNSSVYHINGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDLIGSARLKDPIQTLCRRVEILNEQRGEKLNRVKMVEKE
KDALEADRNKAIEFLCLENKMFKEKNNICQYYIYDLKKRINDLEMQKEKINEETKDVNEK
SSKLADEMKTKNKALKELEKKLNKITTFVEENKEKFTQLDLQDVKIRENLKHAKSKAKKL
EKQLQKDKEKVEELKNVPSSSEKAISEATSKKELLEKTKEKEEEKLKQVMDSLKEETQGL
QEEKESKEKELMEFSKAVNEARSKMDVAQSELDIYLSRHNTAVSQLNQAKEALMTTSETL
KERKAAIKDIDVKLPQAEQELKEKENELEKLGREESGAKNLVRNLRQKVEEAKSSLALSR
SRGKVLEALLQQKKSGNIRGLYGRLGDLGAISEKYDVAISSSCGALDNIVVDTIDTAQEC
VNFLKARGIGVATFIALDKMAVWEKKIQKIPTPENTPRLFDLVKVEDEKVRLAFYFALRD
TLVANNLEEATRVAFQNDKRWRVVTLQGQIIEQSGTMTGGGGKIMKGRMGSSVIMDVSEE
EISKMESQLQKDSERAVQCEEEKLQLEEAIRKLRQDVREMRNTLEKYTASIQSLSEQEIH
LKTQVKELEANVIAAAPDKNKQKELEKILNSYKKDYDCIAEKAGKIENEVKRLHNLIIEI
NNHKLKAQQDKLDKINKEIDECTSAVTKAQVAVKTADRNLKKSEESVLRTEKEIEDNEKE
IKNLTEELTTLEDKATEVINDCRQAEEALPAVQEEHRGLLQEIKTIQDDEHALQKEALNI
KLKIEQIDSHISAHQSKIKYWQKEISKLSLHPIEDKPPEELPVLSQEELEAIKDPDVITN
QIALLEAQCHEMKPNLGAIAEYKKKEELYLKRVAELDDITNERDNFRQAFEDLRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVATNPKVIASKGLAELGALGCSIAQK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaacaaccaacagagaccatgccaagcaagagcaccaaaacctctacagca
gcccatcggaaaggcagagagcccttagaggggtccaccagtgacatggaagtggaaaac
gaaggtgacagacagcttggcgaagtacctccacaagcagtctcaaatgaggtgcttgat
aatcgaagtttagaagagattttgggtagcatctctcctcccccacctccagcaatgacc
aatgaagctggtgctcctcgtctcatgataactcatattgtaaaccagaacttcaaatcc
tatgcaggggagcaaaccttgggaccttttcataagcgtttttcatgtattattgggcca
aatggcagtggaaaatccaatgtcattgattcaatgctttttgtgtttgggtatcgagca
caaaaaatcagatccaaaaaactctctgtgctgatccataattctgacgaacatacggac
atccagagttgttctgtggaagtccacttccaaaagatcattgacaaggaaggagatgat
tacgaagtcattcctaacagcagtttttgtgtatctagaactgcttatagagataattct
tctgtctaccatatcaatggaaagaaaaagacattcaaagatgtcggtattcttcttcga
agccatggcattgatctggaccataacaggttcttaattttacagggggaagttgagcaa
atcgcgatgatgaaaccgaaaggccagactgaacatgatgagggcatgcttgagtactta
gaagacttaataggatctgcacgactaaaagatcctatccaaactctgtgtcgcagagta
gagattttaaatgaacagagaggagaaaagttaaatagagttaaaatggtggaaaaagag
aaggatgccttggaagccgacaggaataaagccatcgaatttctttgtttggaaaacaaa
atgtttaaagaaaagaataatatctgtcaatactatatctatgacctaaagaaacgaata
aatgatctggaaatgcagaaagaaaaaattaatgaagaaacgaaagatgttaatgagaag
agtagtaaacttgcagatgaaatgaaaaccaagaataaagctttaaaagaactggaaaag
aaactcaataaaattacaacgttcgtagaggaaaataaagaaaaatttactcagttggat
ttgcaggatgttaaaataagggaaaatctaaaacatgccaaaagtaaggctaaaaaactg
gagaagcaacttcaaaaggacaaagaaaaggtagaagaattgaaaaatgtaccttccagt
agtgaaaaagctatcagcgaagcaacatctaagaaagagcttcttgaaaagacaaaagag
aaagaagaagaaaaactcaagcaggttatggatagccttaaggaagaaacacaaggactt
caggaagaaaaagagagcaaagagaaagagcttatggagtttagcaaagcagtgaatgaa
gcacgttcaaagatggatgtagcccagtcagagcttgatatctatctcagccgacacaat
actgctgtgtctcagttaaatcaggcaaaggaggctttgatgactacttcagaaaccctt
aaggaaaggaaagctgctatcaaagatatagatgtaaaattaccccaagctgaacaggaa
ttaaaggagaaagagaatgagcttgagaagctgggaagagaagaatcaggtgctaagaat
cttgttcgaaatctgcgtcaaaaagtagaagaagccaaaagttctttagcactaagtcgc
agtcgaggaaaagtgcttgaggctctgcttcagcagaagaaatctggaaatattcgtgga
ctatatggaagactgggagacttgggagctatcagtgaaaagtatgatgttgctatttca
tcgtcttgcggtgccttggacaacatcgttgttgatacaattgatactgcacaggaatgt
gtgaatttcttaaaggcaagaggaattggagttgccacatttatagccctggacaaaatg
gctgtatgggaaaaaaaaattcaaaaaatcccaactcctgaaaatactcctcggttgttt
gatctggtgaaagtagaagacgagaaggttcgcctggctttttatttcgcattacgtgat
accctagtagctaataacttggaagaagccaccagagtagcgttccaaaacgataaaaga
tggagggtggtaacactgcaaggacaaatcattgaacagtcaggaacaatgactggtggg
gggggtaaaataatgaagggcagaatgggttcttcagtcataatggatgtttcagaagaa
gagatcagtaaaatggaatctcaactgcagaaggattctgaaagagcagtacagtgtgaa
gaagagaaattacaacttgaagaagccataagaaaactgcgccaagatgttcgggaaatg
agaaatactttagaaaagtatacagcaagtatccagagtttatctgaacaagaaattcat
ctaaaaacccaagttaaggaacttgaagcaaacgtaattgctgctgctccggacaaaaac
aaacagaaagaattggaaaaaatccttaatagttataaaaaagattatgattgcattgct
gagaaagctggtaaaatagaaaatgaagttaaacgattacataacctcataattgagatc
aataatcataaacttaaagcacagcaagacaaacttgataagatcaacaaagaaatagat
gaatgtacttcagctgttactaaagcccaagtggcagtcaagactgcggacagaaacctg
aaaaaatctgaagagtctgttcttcgcacggagaaggaaattgaagataatgagaaagaa
attaaaaacttgacagaagagctgactacgctagaagacaaagctactgaagtcataaat
gactgcaggcaagcagaagaagcgttgccagcagttcaggaggagcatcgcggtttactc
caggagattaaaactattcaagatgatgaacatgcacttcaaaaggaagctcttaatatt
aagctgaaaattgaacaaattgatagtcatatttctgcacaccagtcaaagattaaatac
tggcaaaaagagatatcaaagttatccctgcaccccatagaagataagccacctgaagaa
cttccagtactaagtcaggaagagcttgaggctatcaaggatccagatgttatcactaat
cagatagctctcctggaagcccagtgtcatgaaatgaaacccaaccttggtgctattgcg
gaatacaagaagaaggaagagctatacttgaaacgtgtggctgaattggatgacattacc
aatgagagagacaacttcagacaagcttttgaagatcttaggaaacaaaggctaaatgaa
tttatggcaggatttaatgtaataacaaataaactgaaggaaaactaccagatgcttact
ttgggaggcgatgctgaattagaacttgtggacagtctggatcccttctctgagggaatc
atgtttagtgttcggcctccgaagaaaagttggaagaagatatttaacttatcaggagga
gagaagactctcagttcactggctctagtgtttgctctccatcattacaagccaacgcca
ctttattttatggatgagatcgatgcagcacttgacttcaaaaatgtatctattgtagcg
ttttacatatatgagcagacaaaaaatgcacaatttatcatcatctccctgcgaaacaac
atgtttgagatcgcagacagattaattggaatttataagactcacaataccacgaaaagt
gtggcaacaaaccccaaagttatcgcatctaaaggactggctgaactcggtgctcttggg
tgcagtatagctcaaaaatag
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