KEGG   Calonectris borealis (Cory's shearwater): 142085539
Entry
142085539         CDS       T11211                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbor04121]
    142085539 (HLTF)
   03400 DNA repair and recombination proteins [BR:cbor03400]
    142085539 (HLTF)
Enzymes [BR:cbor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     142085539 (HLTF)
Ubiquitin system [BR:cbor04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    142085539 (HLTF)
DNA repair and recombination proteins [BR:cbor03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    142085539 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-RING_2 DEAD ResIII zf-ANAPC11 RING_XB3-XBAT31 zf-C3HC4_4 zf-rbx1 HDA2-3 zf-Nse Prok-RING_4 zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 142085539
NCBI-ProteinID: XP_075013699
LinkDB
Position
9:30372979..30399339
AA seq 985 aa
MSWRLPKDSARGCFQYNICRGERNYSRFSSSDFYGSLGLEDFLPVGDTSGTEEDTDSAIL
YGTLRGSVVGLRYYTGIVNNNEMVALQREPNNPYDKNAVKVNNVNGDQVGHIKKELAAAL
AGIMDNKLALVEGVVPYGARNAFTMPVQMSFWGREENKKAVLDQLKRHGFKLAPPLKVGS
ECGFGSKWISGRAGPSYSAPVHAAVQLTTEQLKSEFDKLFEDLKEDDKTCEMEGAEAVGT
LLLPHQKQALAWMVSRENSTDLPPFWEERSNFYYNILTNFAEKQQPKNVLGGILADDMGL
GKTLTTIALILTNFQDGKPLPVEKITSDKFYEESGTNSMNNVGRRLCKDSSNVMEPGVSK
VKKFETTPLKSSSCLPKRDKAKKPRYSGSSDLGESEEWLLQQTETTSCVIQEDTGFASVL
LSSSTCLKRQIKRKGTTSIQSVEKKYSDDGPRATLIVCPLSVLSNWIDQFEQHIHRDFHV
NIYVYYGSDRSKDPSVLSEQDIVLTTYNILATDYGIRGDSPLHKVKWLRIVLDEGHTIRN
PNAQQTKAALNLEGHRRWVLTGTPIQNSVKDLWSLISFLKLKPFTDREWWHRTIQRPVTM
GTPGGLGRLQSLIRSITLRRTKTSKVKGKPVLELPERKVLIQHVTLTEEERQIYQSVKKE
GRAAISRFFSEGTVLAHYADILGVLLRLRQLCCHPHLCINTSSSFSADNKTPEELHETLV
SKMKLVLSSGSDEECAVCLESLSFPVITRCAHVFCKPCIFEVIRSEQPNAKCPLCRNELR
VEHLVECPLEEEIDSSYGKKSDQEWVSSSKINALMHALVELRRNNPTAKCLIVSQFTTLL
SLIEKPLKESGFAFTRLDGSMAQKKRAEAIQCFQSSQAGSPTVMLLSLKAGGVGLNLTAA
SRVFLMDPAWNPAAEDQCFDRCHRLGQKHDVVITKFIVKDSVEENMLKIQNKKRELAAGA
FATKKPSASEVKQTKINEIKALIDL
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgtcgtggaggctgcccaaagattctgcaagaggatgctttcaatataatatctgtaga
ggagagagaaactactcccgtttttcctcttctgacttttacggcagtcttgggttggaa
gacttcctccctgtaggtgacacttctggaacagaggaggatacagactcagctatctta
tatggaactttgcgaggaagtgttgttggattacgatactacacggggattgttaataac
aatgaaatggttgcacttcagagggagcccaataatccttatgataaaaacgcggtgaaa
gtaaataatgtgaatggagaccaggtaggccatataaaaaaagaactagcggcagcattg
gcaggcattatggacaacaaactagcattagttgaaggggttgtcccttatggagcaaga
aatgcttttaccatgcctgtacaaatgagcttttggggaagagaagaaaacaagaaagca
gtgctagatcagctaaaaaggcacggatttaaattggctcctcctctgaaagtaggttca
gaatgtggttttggatcaaagtggatttctgggagagctggtccaagttatagcgctccg
gttcatgctgctgtgcagttgacaactgaacagcttaaaagtgaatttgacaaattgttt
gaggatctgaaagaagatgataaaacttgtgaaatggaaggagcagaggctgttggcaca
ctcttgcttccccatcaaaagcaggcattagcctggatggtttcacgtgagaacagtact
gatttgccaccgttttgggaagagagaagtaacttctattacaatatacttacaaatttt
gcagaaaagcagcaacctaaaaatgttcttggaggaatactggctgatgatatgggactg
ggtaaaacacttactactattgcattgattctcacaaattttcaagatggcaagcctctt
cctgttgaaaagatcacaagtgataagttttatgaggaatctggtactaacagcatgaac
aacgttggacgcagactatgtaaagactctagcaatgtgatggagcctggtgtttctaaa
gtaaaaaagtttgaaactactccgttgaaatcctcaagttgtcttccaaaaagagataaa
gccaagaaacccagatattcaggaagcagtgacttgggagagtctgaagaatggctactg
caacaaacggaaacaacttcctgtgttatccaagaagatacaggttttgcatctgttctt
ctatcttcatctacttgcctaaaaagacaaataaagagaaaaggtaccactagcattcag
tcagttgagaagaaatattctgatgatggccccagagcaacactgattgtatgtccactg
tctgtcctaagcaactggattgaccagtttgaacaacatatccaccgagattttcatgta
aatatttatgtttattatggttctgaccgtagcaaagacccatcagttctttcagaacaa
gacattgtactgacaacatacaacatcttagctactgattacggaatcagaggtgacagc
cctttacacaaagtcaagtggctgagaattgtgttggatgaggggcacactatacgaaat
ccaaacgctcagcaaactaaagctgccttaaatctggagggacacagaagatgggtactt
acaggcactcctattcagaattctgtaaaagatttgtggtctcttatttccttcttaaaa
ctgaaaccttttactgatcgagagtggtggcacagaacaattcaacgtccagtcacaatg
ggaactccaggaggacttgggcgtttacagtctctgattaggagtattacccttagaaga
actaaaacaagtaaagttaagggaaaacccgttttggagttaccagaacgtaaagtactt
attcagcatgttacgcttacagaggaagagagacaaatctatcagtctgtgaagaaggag
ggcagagctgctattagcagatttttcagtgaagggactgtactagctcactatgctgac
atccttggtgtcctgctcagattgaggcagctttgttgtcatcctcatctttgtataaat
acatcttctagtttttcagctgataataaaactcctgaagaactgcatgagacattagtg
agtaaaatgaagttggttctgagctctggttcagatgaagaatgtgcagtttgcttagaa
tcactgtcatttcctgtgatcacacgctgcgcgcatgtgttttgtaagccatgtattttt
gaagtcatcagaagcgaacagccaaatgccaaatgccctctctgtaggaatgagcttcga
gtagagcacttggtggaatgtcccctagaagaggaaatagactccagttatggaaagaag
tctgatcaggagtgggtatccagttcaaagataaatgctctcatgcatgctttggtagaa
ctacggaggaataatccaactgctaaatgtctgattgtttctcagttcacaactttgctg
tcactgatagaaaagcccttgaaagaatcagggtttgcctttactcgtttggatgggtca
atggcacagaagaaaagagcagaagcaattcagtgtttccaaagcagccaagcaggatcc
ccaactgtaatgcttttgtctctgaaagcaggtggagttggattaaatctgacagcagct
tcccgagtgtttttaatggatcctgcttggaatcctgctgcagaagaccagtgttttgac
aggtgtcacaggctgggtcagaagcatgatgttgttattactaagttcattgtgaaggat
tcagtggaagaaaatatgctgaaaattcagaataagaagagggaacttgcagcaggagcc
tttgctaccaaaaagccttcagcaagtgaagtaaaacaaaccaaaattaatgaaattaag
gctttaattgatttatag

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