Calonectris borealis (Cory's shearwater): 142085666
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Entry
142085666 CDS
T11211
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbor01001
]
142085666 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142085666 (TRIM24)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142085666 (TRIM24)
Protein kinases [BR:
cbor01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
142085666 (TRIM24)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142085666 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
142085666
NCBI-ProteinID:
XP_075013868
LinkDB
All DBs
Position
1:complement(63820405..63888066)
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AA seq
1052 aa
AA seq
DB search
MEEAAAAVVAAAAAVAAGGPCPADRTGAAALSGENEAESRQGPAERGGEVAPLNLLDTCG
VCGQPIQSRRPKLLPCLHSVCLRCLPQPDRYLMLPPAIPSSAAGTPKEPQPPAPPSSPVS
SPASPLHCTPVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAE
ANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQL
KLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIEMLITKLMEKTKYIKYTGKQI
QNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQEVAG
LSKQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDASPVTNNTIQFHCDPS
FWAQNIFNLGSLVIEDKETPPHMPKSPVMERNLQPPGSLPSNQLSKFPTQISLAQLRLQH
MQQQVMAQRQQAQRRAGPVGLPNPRMPGAMQQPPASHQAPPRLIHFQNHSPKSNGSALPA
QQMRFPQNQNLPRQAIKPNPLQMAFLAQQAIKQWQIGSGQTSTALSTASSTTSTPSSPTV
TSAVGCDGKTYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDNVVRKDGTAEQNQPKPP
SNRTVQSPNSSVPSPGLSGGVSVTNIHPPIRSPSASSVGSRESSGSSSRPPGADSTHKVP
VVMLEPIRIKQESSAPNENFDFPIVIVKQETDEESRPRNATFSRSILTSLLLDSNHNSTS
DEAVLRTDAPDSTDDQPGVLQENTSSGKTGWIGPPHTGEGRKEDDPNEDWCAVCQNGGEL
LCCEKCPKVFHLSCHVPTLMSFPSGEWICTFCRDLSKPEVEYDCDKPAHSSEKRKLEDTV
GLAPIDRRKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLEVTNSF
YTKPEDFVADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEELLRNLYPERKFPVQPSCQS
EKDNPELNDDSDDDFVQPRKKRLKGEDRQLLK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcagcggcggtagtagcggcggcggcggcggtggcggcgggggggccc
tgcccggcggatcgaacgggggcggcggcgctgagcggggagaacgaggccgagagccgg
cagggcccggcggagcgcggcggggaggtggctccgctcaacctgttggacacttgcggc
gtgtgcgggcagcccatccagagccggcggcccaagctactgccctgcctccactcggtc
tgcctccgctgcctgccgcagcccgaccgctacctcatgctgccccccgccatcccctcc
tcggccgccggcacccccaaggagccgcagccgccggcgcccccctcctcgcccgtctct
tcgccggcctcacccctgcactgcacgcccgtcggtgttatccgctgtccaatttgtggt
caggaatgtgcagagagacacatcatagataacttttttgtgaaggataccacagaggtt
cccagtagcacagtagagaaatcaaatcaggtctgcacaagttgtgaagacaatgcggaa
gctaatggtttttgtgtggaatgtgtagaatggttgtgcaagacctgcatcagagctcac
cagagggttaaattcacaaaggatcatacagtaagacagaaagaggaagtatctccagag
gcagttggtgtgaccagtcagcgacctgtgttttgcccttaccacaaaaaagagcagctg
aagttgtattgtgaaacctgtgacaagctgacctgccgagactgtcagttactagaacac
aaagagcacaggtaccagtttatagaagaagcttttcaaaaccagaaagtgatcattgag
atgctaatcaccaaactgatggagaagactaagtacataaaatatacagggaagcagatc
caaaacagaattcttgaagtgaatcagaatcaaaagcaggtggaacaggatattaaagtt
gccatatttactctgatggtagaaataaacaaaaagggaaaagctctgctgcatcagttg
gagactctggcaaaagagcatcggatgaaacttctgcagcagcagcaggaagtggcaggt
ctctctaaacagctggaacatgtcatgaatttttccaaatgggcggtttccagtggaagc
agcacagcactactgtacagcaaacgcttgattacatatcgactacggtatcttctccga
gcaaggtgtgatgcttcaccagtgactaacaataccatccagtttcactgtgatcctagc
ttctgggctcaaaatattttcaatctaggttctttggtaattgaagataaagaaacccca
ccacatatgcccaagagccctgtcatggaaagaaacttacagccaccaggcagcttacct
tcaaaccagctgtctaagttcccaacgcagataagtttagctcagctccgactccagcac
atgcagcaacaggtcatggctcagagacagcaagctcaacgcagagcaggtccagtaggt
ttaccaaatccaagaatgccaggagccatgcagcagcctcctgcttctcatcaggcacct
ccacgcttgattcattttcagaatcatagccccaagtccaacggttcagctcttcctgca
caacagatgagatttccccaaaatcagaacctaccaaggcaagcaataaagcccaacccg
ttgcaaatggcattcttggcacagcaagctataaaacagtggcagatcggtagtgggcaa
acttcaactgccctttcaactgcaagcagcacaacatctactccatccagccccacagtc
actagtgctgtaggatgtgatgggaagacatatggtcctcctgtgatagatttgagttct
ccagtgggtagctcctacaatctaccatctcttcctgatattgattgttcaggaaacatc
acactggataatgttgtaaggaaggatggcactgcagagcagaatcagcccaaaccccct
tcaaacagaactgtgcagtcaccaaattcatcggtaccatcaccaggcctctcaggagga
gtcagtgtgacaaacatacaccctccaattcgttcacccagtgcctccagtgttgggagc
agagagagttctggctcctccagcaggccaccaggagctgattcaacacacaaagtccca
gttgttatgttggagccgatcagaattaaacaggagtcaagtgcaccaaatgagaacttt
gatttcccaattgttatagtgaagcaagaaacagatgaggaatcccggcctcggaatgcc
accttttcaagaagcatacttacttcattgctgttagatagcaatcataattccacttct
gatgaagctgtcttaagaacagatgcaccagacagcacagatgatcaaccaggggttctg
caggagaacacatccagtgggaagacaggatggataggccccccccacactggggagggc
aggaaagaggatgatcccaatgaagattggtgtgcagtatgtcaaaatggaggggagctc
ctttgctgtgagaagtgtcccaaagtattccatctttcttgtcatgtccctacattgatg
agctttccaagcggagagtggatttgtacattctgtcgggatttgtccaagccagaagtt
gaatatgactgtgataaacccgctcacagctctgaaaaaagaaaattggaagacactgtg
ggtttggcaccaatagaccgtaggaagtgtgaaagactgctgctatacctctactgtcat
gaaatgagtcttgcttttcaagatccagttcctcccacagttcctgattactacaaaata
atcaaaaagcctatggacttgtcaaccattaagaaaagacttgaagtgaccaattcattc
tacacaaagccggaagattttgtggctgatttcagactgattttccaaaactgtgctgaa
tttaatgagcctgattcagaagtggctgatgccggcatgaaacttgaagcgtactttgaa
gaacttctaaggaacctttatcctgagaggaagttccctgtacaacccagctgccagagt
gaaaaagataatccagaacttaacgatgactcggatgatgactttgtacagccccggaaa
aaacgcctcaaaggagaagaccgtcagttgcttaaataa
DBGET
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