Calonectris borealis (Cory's shearwater): 142085840
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Entry
142085840 CDS
T11211
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142085840 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142085840 (TRIP12)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142085840 (TRIP12)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
HECT type E3
142085840 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
142085840
NCBI-ProteinID:
XP_075014338
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All DBs
Position
9:complement(12110935..12194096)
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERINTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLVSIPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagaatcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaatctaagagaagacacttagaccaagaa
cagccgaagtctacgcaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaaatcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gctagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaggtggctcttcaaag
tttgactgggctgctcgattcagccccaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagccgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcacgtacagatgaggctccccaggga
gctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagagagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaaagtcag
caactacaggcagtgatagagatgtgccagctgttggtcatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggagcac
aactttgacattatgaaccatgcatgtcgggccttaacatatatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatt
cagtgcattgatgtggcagagcaggcgcttacagccctggagatgttatcacgcaggcat
agtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttc
agtataaatgcacaaaggaatgcactagctattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccag
caactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacacttgcagtccaacttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgacctcgttccacgaagtcctcaagaactttatgagcttacttctcttatctgcgaa
ctgatgccttgcctgccaaaagagggaatttttgctgttgatactatgctaaagaaagga
aatgcgcaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
ataagcctgtctacacttgggcgtgtctatactattgattttaactctatgcagcaaata
aatgaggatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaataca
aacactagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagag
gacccagaactggcaaaatcctttatcaaaacattgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggca
gagattttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaacttagcagagtctgaggctttgctgacaagcccaccgaaagta
tgcactaatggatcaggaacactgggtaccactacaacaataagtactggaacagccact
gctgccagtaatgcagctgctgatttgggctctcccagcttacaacacagccgggaggat
tctttggatctgagcccacagggacgactgagcgatgttctaaagagaaaaagactgcca
aaacgaggcccaaggagaccaaaatactctcctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttcaaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacgttattttagt
tctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggagtctgatgtctcctcctttgaaatccagcatagtgggtttgttaaacaa
ctgctgctttatttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccactccctggagaagaaccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctc
agtcagatggaacagtttcctgtcaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaatta
aaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggc
tacggaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcaattt
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagttaggcagtac
agtttgcaagctgaggaggagagggagtctacagatgatgaaagcaacccattaggaaga
gctgggatttggacaaaaacgcataccatttggtacaaacccgtgcgagaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagagcacaaactgctcccacgaaaacc
tcccctagaaattctaaaaaacatgatgaattgtggcatgatggtgtatgcccttcggta
ttaaatcctctggaagtttacctcgtatctattccacctgaaaacataacatttgaagat
ccctcattagatgttattcttcttttgagagttttacatgctatcagtcgatactggtat
tacttgtatgataatgcaatctgcaaggagataattccaacctcagagtttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
ataccaacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccgcgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccccacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggt
accaagtacatccataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggattttagactggtggaccttcctcttggacttcctttttataaatggatg
ttacgacaggaaacttccttgacatcgcatgacttgttcagtattgatccagtggtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggacaaa
acacagaccaaagaaagtctacagtatgcgttggaggctttgactatgaatggctgctcg
gtggaagatctggggctggacttcacacttcctggatttcctaatatagaactgaaaaaa
gggggaaaagatacaccagtcaccatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgttgccagacagtttgactcattcagagatggatttgaa
tcagtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgcggcagtaaaacagacacttgggatgcaaagactttaatggaatgttgcaggccagat
cacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagcttt
gatagtgagcagcaaagactgtttcttcagtttgtgacaggtagccccagactgcctgta
ggaggctttcgaagtttgaatcctccgttgacaattgtacgcaagacatttgagtctaca
gagaatccagatgatttcttgccctcagtaatgacttgtgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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