Calonectris borealis (Cory's shearwater): 142085859
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Entry
142085859 CDS
T11211
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142085859 (TRPC1)
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142085859 (TRPC1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Dsc3_C
RIN1
Motif
Other DBs
NCBI-GeneID:
142085859
NCBI-ProteinID:
XP_075014410
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Position
9:12699303..12724900
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLT
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGRVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttgtaccagagcgcggacccgtccgcctcggcctcgccgaacaagctgctg
gcactgaaggacgtgcggcaggtgaaggaggagaccaccctggacgagaagctcttcctg
ttggcctgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagctcg
ggcgaaatgaacataaattgtgtagatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagcttcttttggattatggctgccagtcatcggat
gcacttttggtggctattgactcggaagtggtgggagctgttgacattctacttaatcac
cgaccaaaaagatcctcaagaccaaccattgtaaaactaatggaacgcattcagaaccca
gagtactcgacgactatggatgtggcacctgtcattttagctgctcatcgtaacaactat
gaaattctcaccatgctgttaaagcaagatatatcattacccaaacctcatgctgtaggc
tgtgaatgcacactgtgtactgcaaagaataaaaaagatagtctacgacattccaggttt
cgtcttgacatttatcggtgtttggccagtcctgctttaataatgttgacagaggaggat
cccatcctgcgagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gaattcagaaatgattatgaggagctagctcaacagtgtaaaaccttcgctaaagatttg
cttgcacaagcacggaattcacgggagctggaagttattctgaatcacacatctagcgat
gaacatgtagacaagcgaggattgttggaagagaggatgaacttaagccgcttaaaactt
gcaatcaagtataatcaaaaagagtttgtcgctcagtctaactgccagcagtttctaaac
actgtatggtttggacagatggcaggctatcgacgcaagcacacatgcaagaaaattttg
actgttttgacggttggcattttctggccagttctgtccctgtgttacttgttagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacgtttctgttattacttaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggctcact
ggaatggtgtggtcagatgttaaaagactctggtatgatggtttagaagactttttagaa
gaatcccgtaatcagcttagttttgtcatgaattccctgtatttggcaacttttgccctc
aaagtcgttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcctaccctagtggcagaaggtctttttgcttttgctaacgttcttagttatctgcgt
ctcttcttcatgtacacaaccagctctattctgggaccactccagatttcaatggggcag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacccaactttatgataaaggatttactgtaaatgaagaaaaggactgtgcg
gggattttctgtgaacaacagagcaatgacacattccattcgtttattggcacatgtttt
gctctgttctggtatatattctccctggcacatgtagcaatctttgtcacacgttttagc
tatggtgaagaattacagtcttttgtgggtgctgttattgttggtacctacaatgtggtg
gttgtcatagtattaactaaactccttgtggcaatgcttcataaaagttttcagctgata
gcaaatcatgaagataaggaatggaagtttgctcgtgccaagctttggcttagctacttt
gatgacaaatgcacgctacctccacctttcaatgttattccctctcccaagactatctgt
tatcttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcagagtgaaa
cgtcagaacagcctaaaggaatggagaaatctgaagcaaaagagagatgagaattatcaa
aaggtgatgtgttgcttagtccaccgttacttgacttccatgagacagaagatgcaaagc
acggatcaggcaactgtggaaaacctaaatgaactgcggcaagacttgtcaaaattccga
aatgaaatgagagacctgcttggctttcgaacttctaaatatgctatgttttatccaaga
aactaa
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