Calonectris borealis (Cory's shearwater): 142086293
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Entry
142086293 CDS
T11211
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
142086293 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
cbor04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
142086293 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NISCH_C
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
LRR_14
Motif
Other DBs
NCBI-GeneID:
142086293
NCBI-ProteinID:
XP_075015307
LinkDB
All DBs
Position
10:17888968..17921049
Genome browser
AA seq
1421 aa
AA seq
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MEAAAGGEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLVKFPVTAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEINHCGGKLIKGLTSSKHAL
ATMSVRFSATSMKEILVPEASEFDQWEPEGATSSCPVTAVIPTWRTLTTLDMSHNSISQI
DESVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTLNL
AGNHLERLCGLNKLYSLVNLDLSNNKIEQIDEVKNIGNLPCLEKVVLSSNPLSIIPDYRT
KVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLTAA
SSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSGSTPTDHTVPQRCFEIP
DSRCKNQAPASLLDSCKEYGSGRHMCLDRSEEDDCAVPDPCNTVILPFNCMSYTATNQDF
IQHLSALIVQTVQRSPPSFTENKGSPPGDSRTTDKEDGYFEMGLHEGDQTFEFSITSDTR
SDTDNIAVESVDIVKILWSFSIHIHKGLRQFASCLVLTDDMLAVFEIPHQELRGNCQHIS
SALKLTLCFPYTDLTEFGFLLPEICLTLKLKNSDNCLIIVSDSQNLQDFYSCLHMCCSQH
YTSVLPRSTLYCGKANLQEFLCQLMELNCISAEDVEIKGCFPTYLVYGNKTNVQKILHQS
ESAGNNKEWSKNVLCSALYSSVYKSSDQGPCVVHPCWIFLTPQHLYIVKVDFSLLPGKWV
GTEDLESVFKLNRIPLASLVLHPTHGSIQQKGSFLDGHVLELLVGYRFVTAVFVLPHEKF
HFLRIYSLLRTLLQDVKTIIIFKASNKSGAVRNHVVEANRHGQSASFCKPHLTLSSLYPS
EFLMQKITEDNQIPVHIHVSVSLQYVAGLKGHALVEFFHGSIAEVENEELRHLMWSSVLF
YKTPSVEVMACVLLSTKAIYFLLDDSFVHADEHQSDFWNKENSDCENSSFHLSCCFVLKL
NDLQSVNIGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPVD
KDFYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLHSLNILL
YVLAFQVNHVEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQLA
DGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSAPKGNAKQEGSR
SREIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcggcggggggcgaggacggcgaggagcccccgcgggaggcccgagtcctg
ggttccgagctggtggagacctacacggtatatattattcaggtcagtgttggcaatcat
cagtggacagtcaaacatcgttacagtgatttccatgacctgcatgaaaagcttgtttca
gaaaagaaaatagataaaaatctgttacctcccaagaagattattggaaaaaattccaaa
agcctggtggagaaaagacagaaggaattagaggtctacctgcagactctgctagtcaag
ttccctgttactgctccaaaagttttgtcacacttcctacactttcatttatatgagatc
aatgggatcacagctgcattggctgaagagctcttccacaaaggagagcagttgttaatg
gctggagaagtcttcaccatcagacccttgcagttatatgctgtcactcaacagttgcta
caggggaagcctacatgtgctaatggagatgccaaaacagatctaggtcatattctggat
ttcacttgtagactcaagtatttaaaggtcactggaacagggggaccttttggaaccagt
aacatccaggagcatctcttgccttttgatctgtcaattttcaaatcgcttcatcaaata
gagatcaatcattgtgggggaaagcttatcaaagggctgacttcatcaaaacatgctctg
gccacgatgagcgttcgattttcggcaacatcaatgaaggaaatcctagtgcctgaggcc
tctgagtttgatcagtgggagccagagggtgcaacttcaagttgtccagtgactgcagtt
atcccaacttggagaactttaacaactttggatatgagtcacaatagcatctctcaaatt
gatgaatcagtgaaattaattccgaagattgaattcctggatttgagtcacaatggggtg
tctctggtagaaaatttacagcatctttacaaccttgttcacctggacttatcctacaac
aagcttacatcactagaaggtgttcacacaaaactgggaaacatcaaaactctgaattta
gcaggaaatcatctggaaaggctgtgtggtcttaacaaactgtactcattagtcaacttg
gatctgagcaacaacaaaatagaacagattgatgaagtaaaaaacataggaaacctccca
tgcttagaaaaggtggtcttatccagcaatccattgagcatcatccctgattaccggacc
aaagtacttgctcagtttggggacagggcctcagaggtctgtttggataacattgttacc
acagaaaaggaactagacactgtggaagtgctaaaagctattcaaaaagcaaaggaggtg
aaatacaaactgagcaactctgataaaaagatcagtgaggactccaggctcactgctgcc
agctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctgcctcgt
cctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagcagttttttg
caatccagtggttcgactcctacagaccatacagttccccagagatgctttgaaatacca
gactccagatgtaaaaatcaggcacctgcctctctattggattcatgcaaagagtatgga
agtggtcgtcatatgtgtttggatcgttcagaggaagacgactgtgcggtgcctgaccct
tgtaacaccgtcatcttgccttttaattgtatgtcttacactgccacaaaccaagatttt
atccagcacctttctgccttgatagtgcagactgtgcagagatcacccccctcctttaca
gagaataaaggaagccctccgggtgattccagaaccacagacaaagaagatggatatttt
gaaatgggacttcatgaaggagatcagacttttgagttcagcattacttcagatactcgt
tcagatactgacaacatagcagtggagagcgttgacatagtcaaaattctatggagtttt
tctattcacattcataaaggactcaggcagtttgcttcctgtttggttttgactgatgat
atgctagctgtgtttgagattcctcatcaggaattgagaggaaattgccagcacatctct
tctgccttgaaattaacgctgtgttttccatatactgatctaacagaatttggctttctc
ctgccagaaatctgtttaacactgaagctgaaaaacagtgacaactgcttgattattgtt
tcagactcccagaatcttcaagacttttattcctgtttacacatgtgttgctctcaacac
tacacatcagtgttaccaagatcaacattgtactgtggaaaagcaaacctccaagagttt
ctctgtcagcttatggaattgaattgcatttcagcagaagatgttgaaataaaaggttgt
ttcccaacataccttgtttatgggaataaaaccaatgttcagaaaatcttgcatcaatca
gagtcagctggcaataacaaagaatggtcaaaaaatgttttgtgttctgcactttattct
tcagtgtataaatcttctgaccagggtccctgtgtggtccatccgtgttggatatttcta
acaccccagcatttgtacatagtaaaagtggatttcagtttactgccgggtaaatgggta
ggcacagaagacttggaaagtgtatttaagctgaataggattccattagcatcacttgtg
ttgcatccgactcatggttccatccagcagaagggttcttttttggatgggcatgtgctg
gagttgctcgttggatacagatttgttacagcagtatttgttctacctcatgagaaattc
cacttcctaagaatctacagtcttttaaggacactcctgcaggatgttaagactattatt
attttcaaagcttcaaacaaatcaggtgctgtaagaaatcatgttgtggaggcaaacaga
catggtcagtccgcaagcttttgcaagcctcatctgacgctgtcatctttatatccatct
gaatttcttatgcagaagataacagaagataaccagattcctgttcacattcatgtttct
gtgtctctgcagtatgtggctgggctgaaaggacatgccctagttgagtttttccatggc
agcattgcagaggtggaaaatgaagagttgagacatctcatgtggtcttcagttttgttt
tacaagactcccagtgtggaagtgatggcttgtgtgcttctctcaacaaaagctatttac
tttctgttggatgattctttcgttcatgctgatgagcaccagtcagatttttggaacaaa
gaaaactcagattgtgaaaatagttctttccacctctcttgctgctttgtgctaaaactt
aatgacctgcagtcagtaaatattggcctgtttgatcaatacttccgaattactggacac
tctgcagatcatatagttacctgcctgacaagagacagttacaacactcacaccttcata
cagcagcttatggcggttctgtcattgcttgcacgcacaccttcacctgaaccagtagat
aaagacttctactctgaatttgggagtaaaaacacaggaaaaatggagaattatgaactg
attcactctagcagagtaaaatttatttatccaaatgaagaggaaattggggaccttgct
tttctagtggcagagaagatggatggtttgactaatcttcattccctcaacatccttctg
tatgtgttggcatttcaagtaaatcatgttgaaggatctgcccagaacactagttcactt
caacctaaaacacttatattaaccagctctgatttgttcctctttgatgaagattatatc
agttacccactacctgaatttgctaaggaaccaccaaagagagataagtaccagcttgca
gatggaagacgaatccgggatttagatagagtgcttatgggttatcagacatatccacag
gcccttacatttgtgtttgatgatgttcagaatcaggatctgatgcagaatttaacactg
gatcactttggagaaactgatagtgccccaaagggaaatgctaaacaagaaggcagcagg
agcagagagatccagtggtacatctttatcccaagtgcagaaagcagggagaaattaatt
tcattgcttgcaaggcagtgggagatcttgtgtggtagggaactgcctttggaactcact
gggtaa
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