Calonectris borealis (Cory's shearwater): 142086326
Help
Entry
142086326 CDS
T11211
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbor01001
]
142086326 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142086326 (DCAF1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
142086326 (DCAF1)
Protein kinases [BR:
cbor01001
]
Serine/threonine kinases: Other
Other
142086326 (DCAF1)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
142086326 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
142086326
NCBI-ProteinID:
XP_075015360
LinkDB
All DBs
Position
10:complement(19691367..19745342)
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTAASVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggagaaagaacatggcagcgggcaagacatggtccctattctcaccagaatgtccgag
ctgattgagaaggagactgaagagtaccgcaaaggggatccagacccatttgatgaccga
cacccaggtcgagcggacccagagtgcatgcttggtcacttactgaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ttaaacactgctgcctgccgacttcttctggatatcatgccgggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcacgagaggctgat
cagccactacggacatatgcaacgggactattaggaggagctatggaaaaccaagatatt
gctgcaaattacagggatgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagatcctctgctgcctctagatgaagaggctgtggatatggattacggggag
atggcagtagatggagagcaagaggaagtttctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtaaactctgctacaaagttagatgatggggga
ctgagaaaaagcaaatcagggaaacagcatgaaagagacggcttccggaaggccaagcaa
aagctgggcttctccgcttcagagcctgagcggatgtttgttgaactctccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattatacactttaccctttgactcct
gccatagagcagaggctaattcttcagtacctgactcccttaggggagtaccaagagcta
ctacccatctttatgcaactgggatcaagagagctgatgatgtactacattgatttgaag
cgaaccaacgatgtgctgctcacttttgaagctcttaagcatttggcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtgcaaaagttgctggagatt
cctcgtccttccatggcagcaacaggggtctccatgtgcttatattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccataatgtgctttcagatgtagtaaac
tacaccttatggctaatggagtgctcccatgcctcgggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgatggcctt
cgacgtctggttaacctgataagcacgcttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgtagatactttgaggctcatcttgctattaaacttgaacaggtgaagcagtcactc
cagcgcactgaaggtgggattctggtccatccacagcctccctacaaggcctgttcctat
actcatgagcagattgtagagatgatggagttcctgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaagttgtcttgtgtccaactcatgcttcagctc
atttcaatagcatgcaactggaagacgtactatgcaaggaatgacacagtacgatatgct
ttggatgtgctagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgccgaaattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggtccagataatcgaatctccagtattggcaaatttatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacattagct
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgcccatcacagacgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctccccctcttcagcagc
tgtcaaattcagcagctgatgaaagaaccggtgcttcaggacaagcgcagcgagcacgtg
aagttctgcaaatatgctgctgagctgatagagcgtgtctcggggaagccgttgctgatt
ggcacagatgtctctctggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaactgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgttgcggctgctgcctctcctgtgaccctgcctcgcactcct
cgcatagctaacggcatctcagcccgtttgagtagccacacttctgtaggttccactgcc
gcctctgtccatgctcaggcaaggccgtctgcatcccaaggtccacttgcccttccaggc
ccttcttatgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccccgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caggcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccgatttct
gtgttcagggaagcaaatgaggatgagagtggctttacgtgttgtgcgttttctgcaaga
gaacgattcttaatgctgggtacttgcacggggcagttgaaactctataatgtattcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttattgctgacatctgctacgtggagccaacctctgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggacagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgctacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcggcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacatttaatgcaactgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tacctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcggaagatgaagaggatgaagaagaagat
caggaggaagaagagcaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctccgatgatgaggagcttgcc
aacctcctggaagaaggagatgagggtgaagatgaagattctgatgctgatgaggaagtc
gagctgattcttggagataccgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
