Calonectris borealis (Cory's shearwater): 142086506
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Entry
142086506 CDS
T11211
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142086506 (HCN4)
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
142086506 (HCN4)
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
142086506
NCBI-ProteinID:
XP_075015665
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All DBs
Position
11:22651445..22759289
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AA seq
1045 aa
AA seq
DB search
MALSLALSAKAEPRVTSAQRQEFRSARATQSLQPGSSSSSSSSSVAAPVQPHTPLAARRC
PFKKPGCWLRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVL
NFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTAR
ALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWD
GCLQFLVPMLQDFPDDCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDV
WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIH
DYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLR
FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTAS
VRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSG
VFNYQENEIIQQIVQHDREMAHCAHNVQAAAAAAAAAASTPTPVIWTPLIQAPLQAAAAT
TSVAIALTHHPRLPTAIFRPPVSVLGSLGQQSNQTPRQLKRLQSLIPSAGPSAVGSPSST
PSQLHTPGAETPSSSSFHIQQLAGFSAAAGLGQFQVGSPPGGSCQPGLSGASSVGLSQFQ
HAPSGSPLGTAQPMQQQQQQQQPALSSSGFGHFQQATTSSPSTSLTQLSSNSPPSLLNQF
QPTTRPLQGGQLQQLSGSGTLGGMNHFQPPPSSNSPSSSLSQLAQASGGPSSGLCQTHPS
ALGSLTGTIAQLHQERPPFASMSPLQQSGVASPCYTPSGLSPPSQSPVATRTFQCGPSGA
SGSHGSLLLPQTASPPPQILQSKSTPPVPPGRLSQDIKLISASQPSLPQELAQTLSQSSP
HSSRESVSSFSPFPGGGTGLLGKPCSSVPGRVTLPRQMSSGSLPHPLVFGASAAGAASLT
AGGRKDSIVLTGDLEPVRSKLPSNL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcattaagcctggcactgtcggctaaagccgagccgcgggtgacttctgctcagcgg
caggagttccgcagcgccagggcaacgcagtccttgcagcccggcagcagcagcagcagc
agcagcagcagcgttgcggcgcccgttcagccacacacacccttggcagccaggcgttgc
ccttttaagaagcccgggtgctggctcaggttttattgggatttgaccatgctgctcctg
atggtagggaacctgatcatcatccctgtgggcatcactttcttcaaggatgaaaacact
accccatggattgtcttcaatgtggtttcggacacgttcttcctcatcgaccttgtcctt
aacttccgaacaggcattgtggtggaggacaacacagagatcatcctagacccacagagg
atcaagatgaagtacctgaagagctggtttgtggtggattttatctcctccatcccggtg
gactatatcttcctgattgttgaaacccgcattgattctgaggtgtacaagacagcccgg
gcactgcgcatcgtgcgcttcactaagatcctcagcctcctgcggcttctgcggctctcc
cggctcatccgctatattcatcagtgggaggagatcttccatatgacctacgatctggcc
agtgcagtggtgcggattgtgaacctgattgggatgatgctgctgctgtgtcactgggat
ggctgcctccagttccttgtgcctatgctgcaggacttccccgacgattgttgggtgtcc
ctcaaccgcatggtgaatgactcctgggggaagcagtattcctatgcgctgttcaaggca
atgagtcacatgctctgcattgggtatgggcagcaggcgcccgttggcatgtcagatgtg
tggctcactatgctgagcatgattgtcggtgccacctgctatgccatgttcatcggccat
gccacagccctaatccagtccctggactcctcacggcgtcagtaccaggagaagtacaaa
caagtggagcagtatatgtccttccacaagctccctgcagacatgcggcagcgcatccat
gattattacgagcaccgctaccaggggaagatgtttgatgaggagagcatcctgggagag
ctgagtgagcccctccgagaggaaatcataaacttcaactgccggaagctggttgcctcc
atgcccctctttgccaacgcagatcccaactttgtgacatccatgttgaccaagttgcgg
ttcgaggtgtttcagccaggggattacatcatccgggagggcaccattggcaagaagatg
tacttcatccagcatggggtggtgagcgtcctcaccaaaggcaacaaggagaccaagctg
gcagatggctcctactttggagaaatttgcctgctgacccgtggccgccgcacagccagt
gtgcgagctgatacctactgccggctctactccctctccgtggacaacttcaacgaggtg
ctggaagagtatcccatgatgcggcgagcttttgaaactgtggctcttgacaggctggac
agaattggcaagaaaaattccattctgctgcataaagtccagcatgacctcaattcaggc
gttttcaactaccaagagaatgagatcatccagcagattgtgcagcacgacagagagatg
gcacactgtgctcacaatgtccaggctgccgccgctgctgctgccgctgccgcatcgaca
cccacccctgtcatctggactccactgatccaggcacccctgcaagctgcagcagccacc
acttctgttgctatagctctcacccaccacccacgcctcccgacagccatcttccgtcct
ccggtgtctgtcttgggttccttgggacagcaatccaaccagactccaagacagctgaaa
aggcttcagtctctaatcccgtcggctgggccttctgctgttggctctccctccagtact
ccatcccagctgcatacaccaggagcagaaaccccttcgtcctcttccttccacatccag
cagcttgcaggattctcggctgccgccggcttaggccagttccaggtgggatcccctcca
ggtggctcatgccagccgggtttgagcggcgcatcttcagtgggactgagccagttccaa
cacgcaccttctggatcacccttaggtacagctcagcccatgcagcagcagcaacagcag
cagcagccggccctttccagcagtggatttgggcacttccagcaagccacaactagctcc
ccatcaacatcactcacccagctctcatcaaactcaccccccagccttctcaaccagttc
cagcccaccacaagaccactgcaggggggacagttacagcagctctcaggcagtgggact
ctggggggaatgaatcacttccaaccccctccttcttccaactctccatcctccagccta
agccagctggcacaggcctctggcgggccgtcctcaggcctgtgccaaacacatccaagt
gcattaggatctttaactggaacgatagcccagctccaccaagaacggccaccttttgcc
tccatgtctccactacaacagtctggtgtcgcctctccctgttataccccttctggcctt
agtcctcctagtcagagcccagtggcaacaagaacttttcagtgtggcccttctggggcc
tcaggctctcacggatctctgctcctgcctcagaccgccagcccacctccacagatcctg
cagtccaagagcaccccgcctgtgccaccgggacgtctgagccaggacatcaagttgatt
tctgcttcccagccatctttgccccaagagctggctcagacactgagccaaagttctcct
cattcctctagagaatctgtttccagcttctctccttttcctggtggagggactggactt
cttgggaagccttgtagctcagttcctgggcgtgtgactttaccacgtcagatgtcctca
ggttctttaccacatccgctggtgtttggggccagcgctgcaggcgccgcttctctgact
gctggtgggcggaaagattccatagtgctcacaggggatctggaacctgtcagatccaaa
ctgccctccaatttgtga
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