Calonectris borealis (Cory's shearwater): 142086507
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Entry
142086507 CDS
T11211
Symbol
NEO1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04350
TGF-beta signaling pathway
cbor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
142086507 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142086507 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142086507 (NEO1)
Cell adhesion molecules [BR:
cbor04515
]
Immunoglobulin superfamily
DCC/UNC5 family
142086507 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
TM_ErbB1
EphA2_TM
TMEM154
Herpes_UL74
Big_4
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
142086507
NCBI-ProteinID:
XP_075015666
LinkDB
All DBs
Position
11:complement(22776403..22929818)
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AA seq
1462 aa
AA seq
DB search
MEKNKPHGSFREKDLGITVVKGLQIDVVGSLVRTFTPFYFLVEPMDILSVRGASVVMNCS
AYCETSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEGYYQCVATVES
LGTIVSRTAKLTVAGLPRFTSQPESSSVYKGNSAILNCEVNVDLAPFVRWEQDRQPVFLD
DRVFKLPSGALIISNATDMDGGLYRCIIESGGTPKYSDEAELKILPDPEVPQNLMFERQP
SSLTKVTGQSAVFPCVAVGFPTPYIRWTRNEEELITEGYERFLLLAGGSLEISDVTEEDV
GTYTCIADNGNETIEAQAELTVQVPPEFLKRPANIYAHESMDIVFECEVTGKPTPTVKWV
KNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILDLDVAIP
TLPPTSLTSATNDHLAPAATGPLPSAPRDVVATLVSTRFIRLTWRTPVSDPQGDNLTYSI
FYTKEGINRERVENTSRPGETQVTIQNLMPETVYVFRVVAQNKHGPGESSVPLKVATQPE
VQLPGPAPNIRAYASSPTSVTVTWETPLSGNGEIQNYKLYYMEKGQDTEQDVDVGGLSYT
INGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAPPQNLTLEVRNSKSIMLHWQ
PPPAGTHSGQITGYKIRYRKVSRKSDVTESIGGTQLFQLIEGLERGTEYSFRVAALTVNG
TGPATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYG
IGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHSDTSEV
DLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITDARYYTVRWK
TNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELAPAS
PPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLT
HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQASGSAGKGSRPV
DIGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFCTRRTTSHQK
KKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQD
ITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIH
SLDNPHHHFHSGSLASPTRSYLHHQVNPWPIGTSMSHSDRANSTESVRNTPSTDTMPASS
SQTCADHQDPESTTGSYLANAQEEDSAQNLPTAHVRPSHPLKSFAVPAVPPAGSTYDPAL
PSTPLLTQQAPNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRMLEDSESNYEPD
ELTKEMAHLEGLMKDLNAITTA
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaacaagcctcacggcagtttccgagaaaaggatctagggattacggtagtg
aagggattacagatcgatgtagtcggatcccttgtgagaaccttcactcctttttacttt
ctggtggagccaatggacattctgtcagttcgcggagcgtctgttgtaatgaactgttca
gcttattgtgaaacttctccaaaaattgaatggaaaaaagatgggacttttctaaacttg
gtgtcagatgaccgtcgccagttgctaccagatggatctttattaataaacagtgtggtg
cattccaagcataataaacctgatgaaggatactatcaatgtgtggcaactgtggaaagc
ctggggaccattgtcagcagaacagccaagctcaccgtagcaggccttcccaggttcacc
agtcagccagaatcatcatctgtctataaaggaaacagtgcaatccttaactgtgaagtc
aatgttgaccttgcgccgtttgtgaggtgggagcaggatcgtcagccagtctttctggat
gatcgtgtatttaaattaccaagtggagctctaatcattagcaacgctactgatatggat
ggaggactctatcgctgcatcattgaaagtggtgggacccccaaatacagtgacgaagca
gagctcaaaattcttccagatccagaggtgccacagaacttgatgtttgagaggcagccc
tcttcgcttacgaaagttactgggcaaagtgcagtttttccatgtgttgccgtaggattt
ccaactccatatatccggtggacaagaaatgaagaagagcttatcacagaaggctatgaa
agatttcttctgcttgcgggaggcagtctggagatcagtgatgttacagaagaggacgtt
gggacgtatacctgcatagcggataacggaaatgagacgattgaagctcaagcagaactt
acagttcaagttcctcctgaatttctgaagcggcctgcaaatatttatgctcatgaatct
atggacattgtgtttgagtgtgaggtgactggaaaacctactccaactgtgaaatgggtc
aagaatggagacatggtgatcccaagtgactatttcaaaatcgttaaagaacataatctg
caagttttgggtctggtgaaatcagatgaaggattctatcagtgcattgcagaaaacgat
gttggaaatgcacaggctggagcccagctgataatacttgaccttgatgttgccatccca
acattacctcccacttcactgaccagtgccactaatgaccatctagcacccgctgcaaca
ggaccattgccttcagccccgcgggacgtcgtggccaccctcgtctccactcgcttcatc
agactgacgtggaggacgcctgtatcggaccctcaaggagacaacctcacctattcaatc
ttctacaccaaggaaggtataaacagggaacgcgttgaaaatacgagtcgtcctggagag
acacaagtgacgatccaaaacctgatgccagaaacagtttatgtctttcgagttgtggct
cagaacaagcatggccccggagagagctcggtgccgctgaaggtggcaactcagcctgag
gttcagcttcctggtccagcacccaatatccgagcgtacgccagttcacccacctccgtc
actgtcacctgggaaacgccgttgtctggcaatggagaaatccagaactacaagctctat
tacatggagaagggacaggacactgaacaggatgttgatgtaggaggactctcctacacc
attaacggattaaagaaatacacagagtatagtttccgagtggtagcttacaataaacac
ggtcctggagtctcgacccaagacgttgttgtacgaacactgtcagatgtccccagtgcc
ccaccgcagaatctaacgctggaggtacggaattccaagagcatcatgctacactggcag
cctcctcctgcggggacgcacagtggacaaatcactggctacaaaattcgctaccgtaaa
gtgtcccgcaagagcgatgtgacagagagcattggtgggacccagctttttcagctaatt
gaaggtcttgaacgaggtacagaatacagcttccgagtggctgccttgactgttaatggt
accggaccggctaccgactggatatcagcagaaacgtttgagagtgatctagatgaaact
cgtgttcctgaagttccaagttccttacacgtccgtccgcttgtcaccagtatcgtggta
agctggaccccacctgaaaaccagaacatcgtggtgagaggctacgctatagggtacggc
atcggcagtcctcacgcgcagaccatcaaggtggactataagcagagatactacaccatt
gaaaacttagacccaagctcccactatgtcataactctgaaagcgtttaacaacgttggt
gaaggaatccctctctacgagagcgcggtgacccggccgcactcagacacttccgaagtt
gatttgtttgttattaatgctccatacactccagtgccagatccgtctcccatgatgcca
ccggtgggagttcaggcttccattctgagtcacgacaccattcggatcacttgggcagac
aactctctgccgaagaaccagaagatcacagatgctcgctactacacagtgcgctggaaa
accaatattcctgccaatacgaagtacaagactgcaaatgcgaccactttgagctattta
gtgaccgggttaaaaccaaataccttgtatgaattctctgtgatggtgactaaaggtcga
agatcaagtacttggagtatgacagcacatggaacaacttttgaattagctcctgcttct
cctccaaaagacgtgactgtggtgagcaaagagggaaaacctcggacaataattgttaac
tggcagcctccatccgaagccaacggcaaaattacaggatacatcatttactacagtacg
gatgtgaatgctgaaatacatgattgggttattgaacccgttgtgggaaacagactgacc
caccagatacaagaactgacccttgatacgccgtattatttcaaaattcaggcccgcaac
tcgaagggcatggggcccatgtctgaggcggttcagttcaggaccccaaaagctgaatcc
tcagataaaatgcctaatgatcaagcttcaggatctgcagggaaaggaagccgcccagtg
gacataggaccagattacaaaccaccacttggtggcagtaacagtccccatggaagtcct
acttctcccttggacagcaacatgctccttgtaatcatagtatctgttggagtgatcacc
attgtgatagtggtgatagttgctgtcttctgcactcgtcgtacaacttctcaccaaaaa
aagaaacgagctgcctgcaaatcagtgaatgggtcccataagtacaaaggaaactccaaa
gatgtcaagcctcctgatctctggatccatcatgaaagactggagctaaaacccattgat
aaatctccagatcccaatccaatcatgacagataccccaatccctcgcaactcccaagac
atcaccccagttgataattccatggacagcaatatccatcaaaggcggaattcctacaga
gggcatgagtcagaggatagcatgtccacgctggcaggaagaagggggatgaggcccaag
atgatgatgccttttgattctcagccacctcagcctgtgattagtgctcatcccatccat
tcactcgataaccctcaccatcatttccactccggcagcctcgcttctccaactcgcagc
tatctccatcaccaggtcaacccgtggccgattggcacatccatgtcccattcagacagg
gccaattccacagaatctgttcgaaacacacctagcacggacaccatgccggcttcctca
tctcagacgtgtgcagaccaccaggatcctgaaagcaccacagggtcttacctggctaac
gcacaagaagaggattcggctcagaacctccctacggcacatgtccgtccttcccacccg
ctgaagagttttgcggtgccagcagttccaccagctggttccacgtatgaccctgcattg
ccaagcacaccgttactgactcagcaagctcctaaccatccagttcactcggtgaagact
gcatcaattgggactctaggaagaactcgacctcctatgccagtggtagttcccagtgcc
cctgatgtgcaggagaccaccaggatgcttgaggactcggaaagcaattatgaaccggat
gagctgaccaaagagatggcccacctggaaggacttatgaaggaccttaatgccatcact
acagcatga
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