Calonectris borealis (Cory's shearwater): 142086587
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Entry
142086587 CDS
T11211
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142086587 (DENND4A)
Membrane trafficking [BR:
cbor04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
142086587 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
142086587
NCBI-ProteinID:
XP_075015851
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All DBs
Position
11:3170453..3232187
Genome browser
AA seq
1887 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
TTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
SDTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLSNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPQGFLTAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
VDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTSHTAI
PGGLSDFGNNTSFKEEARQGKTCLQDIQEQKEDKRESDSSSLSEVESAKGSGDCLPKLNY
QNSSNAEAPSSIVRLNGTVDSTVAEASTESSVGLLFTSSFEDASEAEVIKSKSLRKRHKS
AIEPDLREIPWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADAKILSSALQKSIR
PKTLNIRTSSLGSKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETSTAVKT
SSEKSRRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEDEDEDDDRSVSTPSARR
DLAEEIVMYMNNMSSPLSSRAPSIELQKPHDDRNASKKSPTVIQPCRRSSLPPNSPRPSS
LTKSKSYHAKNEERPRDRLWSSPAYSPNSPAKEQPQDATSALTLVSSPSFNLDTLLTPKF
DVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGALDSESTSLTDEDV
CNDFESASPQENTTSEIKGIGLSRTSLESSASHDGSSKQFDQCGSLSKFPLPDKSELISS
CSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLP
FLSIEIRDLRRPGRYFLKSSPSTENMQFPSLFANQSGKSCNTAATVGLATSLMSVQEDIN
SNSKSKQHDNICARSIQIPSGRRQNTSGSECTSHPVARSISTFGPLEEDEKENQKISHII
PTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFV
DHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNM
KLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVHLLQKDDDSFNQELLRSMVKSIKMNDV
YGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQ
VKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactactttgttgtcgcaggattaacagatatt
tcaaaaccactagaggaagaaatccacttcaatgatgcttgccataaaatcgctaaacca
aaagaacctattacagatgtaacagtaattaataaatctctgggggaggaagttcctcag
ggatataaatgcatagatgttactccctcaggactgtctgcagatcttaataatggcagt
cttgtaggaccgcaaatatacctttgttatcgccgaggaagggataagcccccactcact
gatttgggggttttatatgatgggaaagaaagagtaaagcaaggctgtgaaataattcaa
actactccatatggtcggcctgcaaatattagtggcagtgcctcatcacaaagagtgtac
atcacttaccgaagagcatccgaaaacatgacacaaaatacgttggctgttacggacata
tgtataatcataccaagtaaaggagaaacccctccacatacattctgcaaggttgacaag
aatcttaataatagtatgtggggctcagcagtatatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcccgaagaagactat
gaatcattcccattaccagaatctgtgcctctcttttgtctacctatgggtgcaacaatt
gaatgttggccatctaacagtaaataccctctcccggttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaatctcacagagaaacaaaaatctcaactgggattagcagctgctgttgagggaaag
tcagacacatgcagaacagttcaaacaaataaatgcatctgtctgctctctcactggcct
ttctttgatgctttcaagaagtttcttacctttctgtatcgttactccatttctggtcca
catgtcctacccattgagaaacacatttcccatttcatgcataaagttccttttccatct
cctcagaggccaagaattctagttcagctatctccacatgataacctgattcttagccaa
cctgtgtcatcaccccttccactgagtgggggcaagttttctacactacttcagaattta
ggacctgaaaatgcagtaactctacttgtatttgctgtgacggaacataaaattctcatc
cattcattgcgaccttctgtccttactagtgtgacagaggcattagtctctatgatattt
cccttccattggccttgtccatatattcctctctgtcccttggcactggcagatgtgtta
agcgcaccatgcccattcatagtgggaattgattcaagatactttgatctctatgaccct
ccaccagatgttagctgtgttgacctagataccaatacaatttctcaaactggagataag
aaagctattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacacttta
agtaatttatatcagcaactggcagaattgcaacagagaccaagagaagatgcattaatg
gaattagcaatgaatgactacgattttaattctgggaagaaattgcatctgttagatttg
gagatccaggaagcattcctgtgtttcatggcctcaatactaaaaggttacaggtcttat
ctcaggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaa
ctacaaggtttcctcaaaagtcgagatcgttcacatcagaagttctacacactgatgacc
aaaactcaaatgtttattcgcttcattgaagaatgttcttttgtcagtgataaggacgca
agccttgcattttttgatgactgcgtggataaagtagatatggacaaaaccggggaaaca
cgacttatagagctggatgagtcatacaagagtgagcatacagtttttataacaccacct
gagatccctcatctgccaaatggtgaagagcacccgctacaatacagctataatggattt
ccagtattaaaactagatttgtttgagcgacctcaaggatttctcacagcaccaaataac
aaactgtcctcaaaagccagtagtcccaacagcccatcgccaatgttcagaagaactaaa
caggaaattaaatctgcacataaaattgctaagaagtactcatccataccacagatgtgg
tccaggtgtttgttacgtcactgctatggtctttggtttatctgccttcctgcgtatgtg
aaagtgtgccattcaaaagtcagggctctgagaactgcatatgatgtgctacaaaaaatg
cacaccaaaaaaatagatccacctgatgaggtatgctaccgagtactcatgcaactgtgt
ggacagtatggtcagcctgtgctagcagtgagagtgctttttgaaatgcagaaagctggt
gttgaccctaatgccattacttacggctactacaataaagctgttttggaaagtacctgg
ccttcaagcaatcgaggtggctacttcctatggatgaaaatacgaaacgttgttctagga
atagcacagtttaaaaaagcattgaaaaagctaccagcaagcacctcacatacagccatt
cctgggggactttcagactttggcaataacacatcattcaaagaagaagccaggcaaggg
aaaacttgtcttcaagatatacaagaacaaaaagaggataagagagagagtgactccagt
tctctgtccgaagtggaaagcgcaaaagggagtggtgactgcctacctaaactaaattat
cagaactcaagtaatgccgaagctccttctagcatagtgcggctcaatggtacagttgac
agtaccgtagcagaagctagcacggagagttctgtaggattgctgtttacatcatctttt
gaggatgccagtgaagcagaagttataaaaagtaaatccttaagaaagagacataaaagc
gcaatagaacctgacttaagggagataccatgggaaagcaggaaccgtaacctgagtgga
gacggcttagtgggactcatgataaatagaataaatcaggaagcaaaccctggagaaatt
gttgaaaaactaggagctgatgccaaaatcctatctagtgcattacagaaaagcataagg
ccaaaaactcttaatatcagaacttcctctttaggatctaagagagaaagcctggagaaa
gaatccagtgatgaagatgcagcttttgattgcagttttacagataaaacagagtctcct
gttatctttgatctggaagacttggatgcagaacctgaaacatctacagcagtgaaaacc
tccagtgaaaaatctagaaggctgcaaagaaagagcagctttccagtaaagccagttgaa
aagacagatgttgaaactggatttgatccactgtccttgctggttgccgagacagaacag
cagaaagaggatgaggatgaggatgatgatagaagtgtttctactccatctgcaaggcga
gatttagctgaagaaatagtcatgtacatgaacaacatgagcagccctttgtcaagtcgt
gccccaagcattgaattgcaaaaaccccatgatgacagaaatgctagtaaaaagagccca
acagtaatccaaccttgtaggaggtccagcctccccccaaactccccaaggccatccagt
cttaccaaatccaagagttatcacgcaaaaaatgaagaaaggccaagagacaggctttgg
tcctccccggcttattccccaaacagtccagcaaaggaacagccacaggatgcaactagt
gcattaacgcttgtgtcttcaccgtcattcaacttggatacgctgttaacacctaagttt
gacgttctaaaaagcagcatgttttctgctggaaaaggggttgcggagaaagctagcaag
tggtactcaaaatttacaatgtacgctgcatcctcaaaggatcaaaattcagaccgagca
agtgtttcatctcttggagctctggactcagaatctacttctctaactgatgaagatgtc
tgcaatgattttgaaagtgcttctcctcaggagaataccacatcagaaattaagggaatt
ggcctcagcaggacaagcctagaaagctcagcttcccatgatggctcatcaaaacaattt
gaccaatgtggttctctttcaaagttccctttacctgacaaatcagagttgatatcttct
tgcagtacaagtagtaccagtgtgtttcagaactacgctatggaggtcctcatctcaagc
tgttcacgatgtcggacttgtgactgtttggttcatgatgaagaaatcatggcaggttgg
acagcagatgattcaaatctcaataccacgtgtcctttctgtggcaatttatttctgcct
tttttaagcatagaaattagagatcttcggcgacctggacgttattttctgaagtccagc
ccttctacagaaaacatgcagttcccatcactttttgcaaatcagagcgggaagtcctgt
aacactgcagctactgttggccttgctacatctctaatgtctgttcaagaggatataaat
tcaaatagcaaatctaagcagcatgacaatatttgtgccagaagtatccagatcccctca
ggaagaagacaaaatacctctgggtcagaatgtacaagtcaccctgtagcaaggagtatc
agtacttttggtccattggaagaagatgagaaggaaaaccagaagatcagccatatcatt
cctactggtagcctgcctgctactttgcaaggaccaacagattccttgggcctagaatgg
cgcttacctagtcctgatcctataacggttccttatctcagtcctctagtggtatggaaa
gagcttgagagcttacttgaaaatgaaggggatcatgcaataacagtggcggactttgta
gatcatcatcctattgtgttctggaatttggtgtggtatttcagacgcttggacttgccg
agcaacttaccaggattaatactttcttctgagcactgtaataagaactccaagattccg
cgaaattgtatgtcagaggacagtaaatatgttcttattcagatgctatgggacaatatg
aaattgcatcaggatccaaggcagcctctgtatattttgtggaatgctcagagtcaaaat
cgcactcttttgtttgagacccagaagtacccaatggtccatttattgcaaaaagatgat
gactcttttaatcaggagctcttgagaagtatggtgaaaagcattaagatgaatgatgtg
tatggaccaatgagtcaaatattggaaagattgaacaaatggccacatattaaaagacag
aggagcctttacagagaaatactatttctttcacttgttgccctaggaagagataacata
gatatagatgcttttgacagagagtacaaaatggcctatgatcgtctcacagctaatcaa
gtgaagaatacgcataactgtgatagaccaccaagtactggagtgatggaatgcagaaag
atttttggagaaccgtatctttaa
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integrated database retrieval system
