Calonectris borealis (Cory's shearwater): 142086588
Help
Entry
142086588 CDS
T11211
Symbol
SLC24A1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
142086588 (SLC24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142086588 (SLC24A1)
Transporters [BR:
cbor02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
142086588 (SLC24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
142086588
NCBI-ProteinID:
XP_075015861
LinkDB
All DBs
Position
11:complement(3233227..3248752)
Genome browser
AA seq
663 aa
AA seq
DB search
MHLPRRRRLQRNRIFFLLAIVLVLSLYQLQFSPSALPAPHTAPQLTDPVKVTSRDLSSNK
TAVTGNVTAAPKIRHCVYVDPEPTVPVTTSVDTAPQRENVSESYPDEKPPYESKGEYPED
LFSVEERRQGWVVLHIFGMIYVFVALAIVCDEYFVPALGVITEKLQISEDVAGATFMAAG
GSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILHLTWWPLFRDIS
FYIVDLLMLILFFLDSVIDWWESLLLLTAYATYVFTMKQNVYLEQWVKQELNKKLNAVQA
ASAEHIRKKSSGAVADDGTQKPADARKLQPASALQRGSSSASLHNSQMRSTIFQLMIHTL
DPLTEAKFKDRVDILSNIAKAKVEILAGQGSKPEEEEKKAPSTVQVTPASDSEPSKDKEK
ADAPQDGQPSSDSGTSEDSSSESDEDSDDDSTDDDENDEPLSLEWPETRKKQAIYLFLFP
IVFPLWSTIPDVRNPDSKKFFVITFFGSIIWIAIFSYLMVWWAHQVGETIGISEEIMGLT
ILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWFLYSVFNGLGPVAV
SSNGLFCAIVLLFLMLLFVIISIAVCKWKMNKLLGLTMFALYFVFLIISVMLEDKIISCP
VSV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaccacggagaaggcggctacaacggaaccgaatctttttcttgcttgccata
gtgttggtcctctctctctatcagctccagttcagcccctctgcccttccagcaccacac
acagcaccccaactcacggatcctgtcaaagtgacttccagggacctctccagcaacaag
actgctgtaacaggcaatgtcacagcagcacccaaaataaggcactgtgtatatgtggat
cctgagccaactgtgcccgtcactacatcagtggatacagcaccacagcgagaaaatgtc
agtgaaagctacccagatgaaaagccaccatatgagtccaaaggagaatatcccgaggac
ctattcagtgtggaagaacgcaggcaagggtgggttgtacttcacatctttggcatgata
tatgtatttgtggccttggccatagtgtgtgatgagtattttgtccctgctttgggagtg
atcacagagaagttgcaaatctctgaagatgtggctggagccaccttcatggccgcaggt
ggatcagcaccagaactcttcacctccctcataggtgtcttcatctcacacagcaatgtg
ggcatcggtaccattgtgggctcagcagtgtttaatatcctctttgtcattggcacctgt
gccctcttctcgagggagatactccacctgacatggtggcccttatttagagacatctca
ttctacattgtagacttactgatgctcatcctgtttttcctagacagtgtcattgattgg
tgggaaagcctccttttactgactgcttatgccacatatgtattcactatgaaacagaac
gtgtacctagaacaatgggtgaagcaggagctgaacaagaagctaaatgctgtgcaggca
gcatcagcagagcatatacggaagaaaagcagtggggcagttgcagatgatggaacacag
aagccagcagatgcgaggaagctgcagcctgcatcagccttacagcgaggcagcagctca
gcctccctacacaactctcaaatgcgcagcaccatcttccaactcatgatccacaccctg
gaccccctgacggaagcaaaatttaaagacagggttgacatcctgagcaacatagccaag
gccaaagtagagattctggctggacaaggatcaaaaccagaagaagaggaaaagaaggca
ccaagcaccgttcaggtaactcctgccagtgattctgaacccagcaaagacaaagagaag
gcagacgcaccgcaagatgggcagccctcttcagacagcggtacctcagaagacagcagc
tctgagagtgacgaagacagtgatgacgacagcacggatgatgatgaaaacgacgagcca
ttatctcttgaatggccagaaactaggaaaaaacaagcaatttaccttttcctctttccc
attgtcttccctctctggagcactatacctgacgttagaaaccccgactccaaaaaattc
tttgtcatcacgttttttggatccatcatctggattgctatattctcttacctcatggtg
tggtgggctcaccaggttggtgaaacaattgggatatcagaggaaattatggggttaacc
atactggcagcaggaacatcaatccctgaccttatcaccagtgtcattgttgcacggaaa
ggcttaggtgacatggctgtctccagctccgtaggcagcaatatcttcgacatcactgtt
ggtttgccagttccttggttcctttattctgtcttcaatggcctcggtccagttgcagtc
agtagcaatggtttgttttgtgcaattgttctcctttttctcatgctcctatttgtgatt
atctcaatcgctgtatgtaaatggaaaatgaacaaactactggggctcactatgtttgct
ctttactttgtgtttttgatcatcagtgtgatgttagaagacaagataatatcctgccca
gtatctgtatga
DBGET
integrated database retrieval system
