Calonectris borealis (Cory's shearwater): 142086667
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Entry
142086667 CDS
T11211
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142086667 (TMC3)
03037 Cilium and associated proteins [BR:
cbor03037
]
142086667 (TMC3)
Transporters [BR:
cbor02000
]
Other transporters
Pores ion channels [TC:
1
]
142086667 (TMC3)
Cilium and associated proteins [BR:
cbor03037
]
Other cilia and associated proteins
Stereociliary proteins
142086667 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
142086667
NCBI-ProteinID:
XP_075016046
LinkDB
All DBs
Position
11:complement(10227274..10250793)
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AA seq
1119 aa
AA seq
DB search
MAAATGSAPAKTAKSCKKYRTVKRHAGIYTYQEPPHSNSDDDIGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTVSKTIPKEHIASAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNNNASNSTNFLATKIFSKEDNLSTTIPDVQIKRNGTVTLEESRTQG
LTVSGSLVNKTVSFNYNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCV
RYLSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMY
LRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQ
EKIYDIVSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQL
RMKIQTERTEDKKKVVQMAVARIQNMDGNDKRPEQESDIISQESSVRSSTPRKNGSVLNF
ESPVSKGTRIQTISQSVPQTVPSTDVARPVNATPTTSTSLTPAPSVSSVQKPRNDHITNR
YPSVVHGSASELCKTKPYTPVTFKKHTEDVHSEPLFRKGIRQVNPDALGAGAPVFVGRRP
YATRYFLVNENESRKKSFRSTSRLQRHFRKDESGDIIELYPRNVRRYVVRTPHQMYSPHP
SEDEEDEEELEREFMNRSHRPHSLSDLRPAPRFYIGERTDGHILMSKDLARVHYKSWDDG
FELDLDRPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSVSIESSSDPQNSSNDQYIQ
VIHSKEKYPKPGTKLTKKKSKNSVDLNMSEPNELVCSNV
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgacgggctctgctccagcaaaaactgccaagtcctgcaaaaagtatcgg
acggtgaagcgacacgccggcatctacacctaccaggagccgccccacagcaattcggac
gatgatatcggtgaagaaaaggctgagagccatgacccagagcagatctttcagaacatc
cagtaccagaaggagattatgtccaacatccgctgccggccgtggccgatgaggcagaag
ctgagggcactcaggcaggcaaaggagatcgtgctgaagtatgaagggaggctcacgaga
acaagaggctaccaagccgctggtgcagagctttggaggaagtttattcgacttgcatat
aattttgtggtaatctttattccttgggaaatgagaataaagaaaatcgagagtcatttt
gggtctggagttgcctcttacttcatcttcttaagatggctattcggaatcaatattgta
cttaccataatgacaggagcatttgtagtcttaccagagctactggccggagcaccgttc
ggcagcacagtcagcaagaccattcccaaggagcacattgcatctgctcaagacctggac
accatctggtcactagggggctacctccagtactctgttttgttttatggctactacggt
cgtgacaggaagattgggaaagctggatatcggctgcctcttgcctacttccttgttgga
atggcagtgtttgcttacagcttcatcattctcttaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgttggagactgttctgtgct
tgggactatttaataggaaaccctgaggctgcagagagcaaagctgctgccatagttaat
agcattagggaagctatattggaagagcaggaaaagaagaaaagcaaaaacttggcagtg
actataagcttaagaattattgcaaacatccttgtgcttctctcgcttgctggaagtatt
tacatcatatactttgtcgtggatcgatcccaaaggttagagcgcaccaaaaaggaattg
actctttgggaaaaaaatgaggtaagcgtagttgtgtcactgattacaatgattgcaccc
tctgcttttgaacttgtggcagctctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgttctatacctgggaaacctctacagtttaatcattgctctc
ctggataaagtggacagtatgagtgtcactgactctgacgttaacaacaatgcaagtaat
tctaccaacttcttagcaaccaaaattttttctaaagaagacaatttatctacaactatt
cctgatgtacaaattaagagaaacggcactgtcacattggaagagagtcgcactcaaggc
ttgacagtctctggctcactggttaacaaaacagtttcctttaactacaacacccagaac
ccacaggatcagtgctgggagacgtatgttggtcaagagatgctaaagctttcaattatc
gacatgattttcacagtcgcaagcatcctgctaattgattttttccgtggactgtgtgtc
cgatatttaagtgattgctggtgctgggatctagaaagcaaatttccggaatatggagaa
ttcaaaattgcagagaatgtattgcatttggtctacaaccaaggaatgatctggatggga
gctttcttttcaccttgcttaccagcattcaatgttctcaagttaattggactcatgtac
ctgaggagctgggctgtgttaacgtgtaatgtaccacatcagcaggttttcagagcatct
cgatccaataatttctacttggccatgttgctgttcatgttgttcttatgcatgttacca
acaatttttgctattgcccgatataagccatctttaagctgtggtcccttcagtggacaa
gaaaaaatatatgatattgtttctgaaacgattcaaaatgattttcccacatggttcaac
acagtgattacttacattagcagtcctgtggttgtcctccctgcactactacttttattc
atgctaatctattacctacaaagtattgcaagatcattaaaattcaccaacaatcaactg
agaatgaagatccaaacagaaagaactgaagataagaaaaaggtggttcagatggcagta
gccagaatccaaaatatggatgggaatgacaagagaccagagcaagaaagtgatattatc
agccaggagtcttctgttcggtcctcaactccccgaaagaatggcagtgtcttgaacttt
gaatctcctgtgagcaaaggcaccagaatacaaaccatttctcagtctgtgccccaaact
gtgccctcaactgatgttgcaagacctgtcaacgcaactcccacaacttcaacctcttta
acgccagctccctcagtatcaagtgtacagaaaccgagaaatgatcatatcacaaacagg
tacccaagtgttgtgcatgggagtgcaagtgagctctgtaaaacaaagccctacacccca
gtgactttcaaaaagcacactgaagatgttcattctgagcctctcttcagaaaaggcatt
cggcaggtaaatccagatgctcttggggcaggggctcctgtttttgtgggacgtagacca
tatgctaccaggtattttcttgttaatgaaaatgagtcccgcaaaaaatcgttccgttct
acctcccgactgcaaaggcacttcagaaaggatgagtcgggagacattatcgagttgtat
ccacgcaatgtcagaagatacgtggttcgaacaccacaccagatgtattcccctcatccc
agtgaagatgaggaggatgaagaggaacttgagagagaattcatgaacagatcccatcgc
cctcactcactgtctgatcttcgcccagcaccacgattttacattggggaacgtactgat
ggccacattcttatgagcaaggatctagccagagtgcattacaaatcctgggatgatggt
tttgagctagacctggacaggcctccatatgcttacaagaaagtgcacctgaactaccct
gagccacgtgtgaaaccaaaatcaaagcaaaagctggagcaatctctaacagaatctgat
tccgtttccattgaatccagcagtgatccgcagaacagcagcaatgaccagtatatccag
gtcattcatagcaaggagaagtatccgaaacctgggacaaaactcaccaaaaagaaatca
aaaaacagcgttgatctaaatatgtctgagcctaatgaactggtatgctcaaatgtctga
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