Calonectris borealis (Cory's shearwater): 142086784
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Entry
142086784 CDS
T11211
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
142086784 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142086784 (FAN1)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
142086784 (FAN1)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
142086784 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf_UBZ
PRP21_like_P
zf-TRAF
zf-WRNIP1_ubi
YabP
Utp12
Motif
Other DBs
NCBI-GeneID:
142086784
NCBI-ProteinID:
XP_075016342
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All DBs
Position
11:17882454..17904842
Genome browser
AA seq
1046 aa
AA seq
DB search
MAEARSSEIKRSRISLSLSKNKKKKGTTKKVEGKGTPSIPSASSSIISFFNNVPPAKISC
PTCGQMVPRHSINEHMDETCQRNHGEIGIIDSTLNSFRNESPPAANVNNNSSSYFSKKLL
NLETSPSKSSLFKTEGSAAQQVSPYFSNSSSVCSINNEPQAQTVKVVSLGSLSSKLSRRR
CIQGGKQIVYKEIDSSPPAVHNMCKSAAARDDDDDEIYAGHSSQKENQLAQGEHQEQNFS
KQEPEFQKEINKCSGEDLVDIVQVSLPADNINGKRLPIGTRSTKTESRSEGVILSPDKFE
THLAIYTSAELTSSLEVKTRPHTQVFPSSKTEVNCGTQNCFSKRDVQVLPVEVHEDFKDE
INHTLSETVGKVEFQNSIGDILDKINEVSSVPSSPGHPYYLQNFLVVVRAVLENKDDVKL
FDEQDMNIITKFCKLSVGGQKLYVRLFQRKLNWLKVNKIEYEEISMDLSPIIEELAEARF
LQTESELEDLCEGLDLLSAPELKTLAKIFHLPNPNGQKQQLVDDFLRLAKQRSVFSRSQA
GIGTVILKRVKDLAGKSVRVCKGPRAVFSRILLLFSLPESMEDEEAGSAGQGQLSTVLMV
NMGRMVFPSYTVNRKTQVFQDREDLIRYATAAHLSNDIATVMVNGNWEEAHHLYMCAKET
WNELKDHPSLSYHRVLPEYLRHFTVGWVYTRILSQGVEILQRLHMYEEAVQELQTLLSQD
VYCTDSRGRWWDRLALNLHQHLKNTKKAIHCIRNGLADPFVRTGHRLSLYQRALRIRDSP
SCKQFRCLFHDLPAVTVEDVTHVTIKGKMCPQMGMGKSVFLMEDIGDEEGGEDFSVSTVM
CSVEELALTHYRQNGFDQGIHGEGSTFITLYGILMWDIIFMDNIPDVFRNSYQTFPLDLY
TDSFYENRRDAIEARLQQLHTASSETLAKLIADIWTTQEGKAAALVSWGRFISLQQVQSL
VSCLGGMFLSGVFRRLSKDLRHCRGGLPDLVVWRTHTNHFKLVEVKGPNDRLSHKQTVWL
SELKKLGATVEVCHVQAVGGKGKRLS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctaggtcttcagaaattaaaagatcccgaataagtttgtcactcagcaaa
aataagaaaaaaaaaggaacaacaaaaaaagtggaaggtaaaggaacaccatctatacct
tcagcatcctcttctattatttccttttttaacaatgttccccctgccaaaatttcttgt
cccacgtgtgggcaaatggtgccaagacacagcataaatgagcacatggatgaaacatgt
cagagaaaccatggtgagattggcatcattgattcaacactcaactcttttaggaatgag
agtcccccagctgcaaatgtgaacaataattccagctcatacttttcaaaaaaactctta
aatctagagacaagtccttccaaaagcagcttattcaaaacagaagggagtgcagcacaa
caggttagtccttattttagcaatagtagttcagtctgtagcattaacaatgaaccacag
gctcaaacagttaaagtagtctctttaggaagcttgtcatctaaactgtccagaagacgt
tgtatccagggaggaaaacagatcgtgtataaagagatcgactcttcacctccagctgtt
cacaatatgtgcaaaagtgctgcagcacgggatgatgatgatgatgagatttatgctggg
catagttctcagaaagaaaatcagcttgctcagggagagcaccaggaacaaaatttttca
aagcaggaacctgaatttcaaaaagaaataaacaaatgtagtggagaagaccttgtggat
attgttcaggtatcattaccggctgataacattaatggcaaaaggttaccaattggtaca
aggagcaccaaaacagaaagtaggtctgaaggtgtgatacttagtcctgataaatttgag
acacatctagccatttatacttcagcagagctgaccagtagtttggaagtcaagactcgg
cctcacactcaggtttttccttcttcgaagacagaagtgaactgtggtacacaaaattgc
tttagcaagcgtgatgtacaagtacttcctgtggaagttcatgaagactttaaagatgag
attaatcatactttgtcagaaactgtgggaaaggtagaatttcagaattccattggggac
attttagacaaaataaatgaggttagctctgtgcccagctctcctggtcacccatattac
ctccagaattttctagtggtggtgcgagcagttttggagaacaaagatgatgtcaaactc
tttgatgagcaagatatgaacattataaccaaattctgcaaattatcagttggtgggcag
aagttatatgtgagactttttcaacgcaagctgaactggttaaaggtgaacaaaatagag
tatgaagagataagtatggatttgtcaccaataattgaagaactggctgaagccagattt
ctgcaaacagaatctgaactggaagacctgtgtgaagggttggatttgctttcagcccct
gagctaaaaacattggcaaagatctttcacttgccaaacccaaatggtcagaaacagcaa
cttgtggatgattttctgaggttggcaaaacaacgttcagtcttcagcaggagtcaggct
ggtattgggacagtgattttaaaaagggtgaaggacttggctggaaaatctgtcagggtc
tgtaaaggccctcgggctgtcttttctcgaattctgctgctattttcactgcctgagtca
atggaggatgaagaagctggtagtgctggtcaaggccagctctccacagtccttatggta
aacatggggcgtatggtgttccccagttacactgtaaataggaaaacacaggtcttccag
gacagagaagaccttatcaggtatgcaactgctgctcatctgtcaaatgatatagccact
gtgatggtaaatgggaactgggaagaagctcatcatctctatatgtgtgctaaagaaacc
tggaacgaactgaaagatcatccctctttgagctatcacagagttttacctgagtatctg
cgacatttcacagttggctgggtgtatacaagaatcctttctcaaggtgttgaaattttg
cagagacttcacatgtatgaggaagcggtgcaggagctgcagactcttctgtctcaggat
gtgtattgtacggacagcagagggcgatggtgggatcgcctagctctgaatttacatcag
cacttgaaaaacaccaagaaggccattcactgcatcagaaatgggctggcagacccattt
gtacgtactgggcatcgtctctctctctaccagcgggccttacgaatcagagactcgcca
agctgcaagcagttcagatgcctgtttcatgatctgccagccgtaactgtggaggatgtg
acacatgttacaatcaaaggaaagatgtgtcctcagatgggaatgggaaaatctgtattt
ctaatggaggatattggtgatgaagaaggaggcgaagacttcagtgtatccacagtcatg
tgctcagttgaggagctggcgttaactcattacaggcagaatggttttgatcagggtatt
cacggggaaggctcaacatttattacgctgtatgggattctgatgtgggatatcattttc
atggacaacattcccgacgttttcagaaactcctatcagacgttccccctggatttatac
actgacagcttctatgagaacaggagggatgccattgaggccagactccagcagcttcat
acagcttcctcagagacactggcaaagttgattgctgacatctggaccactcaggaggga
aaagcagcagcactagttagctgggggcgttttatttccctccagcaagttcagagcctt
gtctcttgccttggaggaatgtttctgagtggtgtttttaggcgactttccaaagatcta
cgccattgcagagggggacttcctgacctggttgtgtggcgtactcacactaaccacttt
aagctggtggaagtgaaaggtcccaatgatcgcctgtcccacaagcagacagtctggctg
agtgagctgaagaagctgggtgctacagtggaggtttgtcacgtgcaagctgttggaggc
aagggtaaacgcctcagctaa
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