Calonectris borealis (Cory's shearwater): 142086806
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Entry
142086806 CDS
T11211
Symbol
TPM1
Name
(RefSeq) LOW QUALITY PROTEIN: tropomyosin alpha-1 chain
KO
K10373
tropomyosin 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04260
Cardiac muscle contraction
cbor04261
Adrenergic signaling in cardiomyocytes
cbor04814
Motor proteins
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
142086806 (TPM1)
04820 Cytoskeleton in muscle cells
142086806 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
142086806 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
142086806 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142086806 (TPM1)
04147 Exosome [BR:
cbor04147
]
142086806 (TPM1)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
142086806 (TPM1)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of microglial cells
142086806 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
CCDC39
Laminin_II
TMF_DNA_bd
Rod_CreS
Sec2p
Nuf2_DHR10-like
CENP-F_leu_zip
Laminin_I
PUMA_CC
HAUS1
FKBP15
DUF745
ERM_helical
TMP_N
Motif
Other DBs
NCBI-GeneID:
142086806
NCBI-ProteinID:
XP_075016425
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All DBs
Position
11:19844587..19865176
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AA seq
386 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLHVTEDARDQV
LEELHKSEDSLLSAEENAAKVSCPCRKQRESNCLSFXSLSVRLSFSVSSALALLLLHDHV
ACYTFSCPPSPLHHFPPVSQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKA
TDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDE
EKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELK
TVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEE
KVAHAKEENLSMHQMLDQTLLELNNM
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagttagag
gatgacattgtgcaattggaaaagcaattgcatgtgacggaggatgcaagggaccaagtg
ctggaagagctacacaagtctgaggatagcctcctctccgcagaggagaatgctgccaag
gtatcgtgcccttgccgcaagcaaagagaatctaactgtctctccttcntctctctctct
gtccgtctgtccttttctgtctcttctgcactcgcacttctccttttgcacgatcacgtt
gcctgctacaccttttcctgcccaccctcccctctccaccactttccacccgtatcacag
ctggaggacgagctggtggctctacaaaagaagctgaagggcactgaggatgagctggac
aaatactccgagtcccttaaagatgcacaggaaaagttggaactggctgacaaaaaggcc
acagatgctgagagcgaagtagcttctctgaacagacgcatccagctggttgaggaagag
ttggatcgggctcaggagcgcttggctactgccctgcaaaagctggaggaggccgagaag
gctgcagatgagagtgaaagaggaatgaaggtcattgaaaatagagcccagaaggatgag
gagaagatggaaatccaagagatccagcttaaagaagctaagcacattgctgaagaggct
gaccgcaagtatgaagaggtggctcgtaagcttgtgatcattgagagtgacctggagcgg
gctgaggaacgcgctgaactatcagaaagcaaatgtgctgagcttgaagaggagttgaaa
actgtgaccaacaacctgaagtcgctggaggctcaggctgagaagtactcgcagaaagaa
gacaaatatgaagaggagattaaagtcctgactgacaaactgaaggaggctgagacccgt
gctgaatttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagag
aaagtggcgcatgccaaagaagaaaaccttagtatgcatcagatgctggatcaaacttta
ctggagttaaacaacatgtga
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