Calonectris borealis (Cory's shearwater): 142086888
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Entry
142086888 CDS
T11211
Symbol
ARIH1
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
142086888 (ARIH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142086888 (ARIH1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
142086888 (ARIH1)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
142086888 (ARIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_14
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
142086888
NCBI-ProteinID:
XP_075016675
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All DBs
Position
11:complement(23171166..23233689)
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AA seq
559 aa
AA seq
DB search
MDSDEGYNYEFDEDEECSEDSGAEEDEEDEEEDEPDDNLDLGEVELVEPGLRVGGERDGL
LGSETGGLGPGGGGGGGGLGGGPGPGGGGGPEQEEDYRYEVLTAEQILQHMVECIREVNE
VIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQ
DMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD
NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ
FCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC
RNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQEELTQRSRAALQRYLFYC
NRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVF
AFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRV
LLQHVHEGYEKDLWEYIED
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggttacaactacgagttcgacgaggacgaggagtgcagcgaggac
agcggcgcggaggaggacgaggaggacgaggaggaggacgagcccgacgataacctggac
ctgggcgaggtggagctggtggagcccgggctgcgcgtcggcggagagcgcgacgggctg
ttgggcagtgaaacgggagggctgggccccggcggtggtggtggtggaggcggcctgggc
ggcgggccgggcccgggcggcggcggcggccccgagcaggaggaggattatcgctacgag
gtgctgacggccgagcagatcctgcagcacatggtggagtgcatccgcgaggtcaacgag
gtcatccagaatccagcgacaattactcgaatactgcttagccatttcaactgggataaa
gagaagctgatggagaggtacttcgatggcaacttggagaagctctttgcagagtgtcat
gtaattaatccaagtaaaaagtctcgaacgcgccagatgaacacaaggtcatcagcccag
gatatgccttgtcagatctgttatctgaactacccaaactcgtactttactggcctagag
tgtggacacaagttctgtatgcagtgctggagtgaatatttaactaccaaaataatggag
gaaggcatgggacagaccatttcatgccctgctcatggctgtgatatcttagtcgatgac
aatacagttatgcgtctgatcacagattctaaggttaaattaaagtaccagcatttaata
accaatagttttgtagagtgtaatcgactgttaaaatggtgtcctgccccagattgccac
cacgttgttaaagtccaatatcctgatgctaaacctgttcgctgcaaatgtggacgtcag
ttttgctttaactgcggtgaaaactggcatgatcctgttaaatgcaagtggttaaagaaa
tggattaagaagtgtgatgatgacagtgaaacttctaattggattgcagcgaacacaaag
gaatgcccgaaatgccacgtcaccatcgagaaggacgggggctgcaaccacatggtctgt
cggaaccagaactgcaaagcggagttctgctgggtgtgtctgggcccctgggagccccat
ggatctgcctggtacaactgtaatcgctacaatgaggatgatgcaaaggcagcaagggat
gcacaggaggaattaacacagcgatccagagcagccctgcagaggtacctgttctactgc
aaccgctatatgaaccacatgcagagcctgcgctttgagcacaagctctatgctcaggtg
aagcagaaaatggaggagatgcagcagcacaacatgtcatggatcgaggtgcagttcctg
aagaaagcagtcgacgtcctctgccagtgtcgtgccacactcatgtacacttacgtcttt
gccttctacctcaaaaagaataatcagtccattatctttgagaataaccaagcagactta
gagaatgctacagaggtgctttctgggtaccttgagcgagatatatcccaagattcgctg
caagacataaagcagaaagtacaggataagtacagatactgcgagagtcgacgaagggtt
ttgttgcagcacgtgcatgaaggctacgagaaggacctgtgggagtacattgaggactga
DBGET
integrated database retrieval system
