Calonectris borealis (Cory's shearwater): 142087038
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Entry
142087038 CDS
T11211
Name
(RefSeq) B-cadherin
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04514
Cell adhesion molecule (CAM) interaction
cbor04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142087038
04519 Cadherin signaling
142087038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142087038
Cell adhesion molecules [BR:
cbor04515
]
Cadherins
Major cadherins
142087038
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Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
142087038
NCBI-ProteinID:
XP_075016835
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All DBs
Position
12:22373128..22377904
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AA seq
668 aa
AA seq
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MKVTQPLDRERIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTREVFRGSVPE
GALPGTSVMQVTATDADDAVETYNGVIAYSILSQEPREPHPHMFTVNRATGTLSVIASGL
DRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPENEAGREV
ARLAATDLDEPSTPAWRAVYSILRGNEGGAFAIATDPASNEGVLRTAKGLDYEAKKQFVL
HVAVANEAPFAVKLPTATATVTVNVEDVNEAPVFDPPVQLARVPEDVPPGQTLASCTAQD
PDKAQGQRIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFAQNSTYTAVLLAVDDGSP
SATGTGTLLLTLLDVNDHGPEAEPRDITVCNRSPQPQVLTVTDRDLPPNTGPFRAELSHG
SGDSWAVEVGDEGDTVTLRLVAPLEPDLYSVYLRLLDQPGKAQLTIVTARVCDCEGPVQS
CPQRPQPATGMPFVLAALGALLALLLILLLLLLFVRRRKVTKEPLLLPEDDTRDNVFYYG
EEGGGEEDQDYDLRQLHRGLDARPEVLLRNDVAPTLLPAPQYRPRPANPDDIGTFIEENL
KAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDRDQDYDYLNDWGSRFKKLADL
YGGGEEDD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacgcagccgctggaccgggagcgcatcgacaagtaccacctcttctcccac
gctgtgtccgagaacggcaaaccggtggaggagccgatggagatcatagtcacggtgacg
gaccagaacgacaacaagccccagttcacgcgggaggtcttcaggggctcggtgccggag
ggtgctttgccgggcacctccgtgatgcaggtgaccgccacagacgcggacgatgcggtg
gagacctacaacggcgtcatcgcctactccatcctcagccaggagccgcgggagccccat
ccccacatgttcaccgtcaacagggccaccggcaccctcagcgtcatcgccagcggcctc
gaccgggagcgcgtgcgggagtacacactgaccgtgcaggcagctgacctggacggcgag
gggctgaccacgacggcgctggcggtgatcgagatcgcggatgtcaatgacaacgcgccc
gagtttgaccccaaaacgtacgaggcggctgtgccggagaacgaggccgggcgggaggtg
gcccggctggccgccaccgacctggatgagccgagcacgccggcatggcgagccgtctac
tccatcctgcgcggcaacgagggaggcgccttcgccattgccacggaccctgccagcaac
gagggcgtcctccgcaccgccaagggtctggactacgaggccaagaagcagttcgtgctt
cacgtggccgtggccaacgaggcgcccttcgccgtgaagctgccgacggccaccgccacg
gtgacggtcaatgtggaggatgtcaacgaggcgcccgtctttgacccgccggtgcagctt
gcccgggtgccggaggacgtgccgccggggcagaccctcgcctcctgcacggcccaggac
cccgacaaggcccaggggcagaggatcaagtacctggtggggcacgacccggcgggctgg
ctggccgtgcaccccgagaacggcctcgtgacagcgcgggaccacctggaccgcgagtcc
cccttcgcccagaacagcacctacaccgccgtgctgctggctgtggacgacggctcgccg
tccgccacgggcaccggcaccctgctcctcaccctgctcgacgtgaacgaccacggcccc
gaggccgagccccgggacatcaccgtctgcaaccgcagtccccagccccaggtcctcacc
gtcaccgacagggacctgccccccaacaccggccccttccgcgccgagctcagccatggc
tccggggacagctgggccgtggaggtcggcgatgaaggtgacacggtcaccctgcggctg
gtggcaccgctggagccggacctctacagcgtctacctgcggctcctcgaccagccgggc
aaagcccagctcaccatcgtcaccgcgcgggtctgcgactgcgaggggccggtgcagagc
tgtccccagagaccccagcccgccaccggcatgcccttcgtcctcgccgccctgggtgcc
ctcctggccttgctgctcatcctgctgctgctgctgctctttgtgaggaggaggaaggtg
acgaaggagccgctgctgctgcccgaggacgacacacgggacaacgtcttttattacggg
gaggagggtggcggggaggaggaccaggactatgacctgcggcagctgcaccggggcctg
gacgcccgccccgaggtgctgctccgcaacgatgtggcccccaccctcctgccggccccc
cagtaccggccccgacccgccaaccccgatgacattggcaccttcatcgaggagaacctg
aaggcggccgacacggaccccacggcccccccctacgactccctgctggtgttcgactac
gagggcagtggctcggaggccacctcgctcagctccctcaactcctccgcctccgaccgc
gaccaggactacgactacctcaacgactggggcagccgcttcaagaagctggcggacctc
tacggcggcggggaggaggacgactag
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