Calonectris borealis (Cory's shearwater): 142087172
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Entry
142087172 CDS
T11211
Symbol
SMPD3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00600
Sphingolipid metabolism
cbor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
142087172 (SMPD3)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
142087172 (SMPD3)
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Motif
Pfam:
nSMase_N
Exo_endo_phos
CBM_6
Motif
Other DBs
NCBI-GeneID:
142087172
NCBI-ProteinID:
XP_075017163
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Position
12:complement(3333237..3396381)
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AA seq
662 aa
AA seq
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MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVASFVPTTYEKRQRADDPCYFHALCI
IITTPIYLALLVASLPFALIGFLLWSPLQSARRPYIYSRLEDKNHANGATLLTEWKAAGN
GKSFCFGSANVCLLPDSLARFNNVFNTQARAKEIGRRIRNGASRPQIKIYIDSPTNTSIS
AASFSSLVSPQGGDNTNRTVNAGIKRTTSMEYKGDNSGSNNSEDSREDKAGAGEPNEGEE
NTCIVRINGEDNGHMSDTETDTVNGQAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLD
SYSASRESLVKVRVGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPA
NLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPV
MDAAYHCYPNGRGTDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQ
LDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSEDKLEQQHSLFTHYKDP
CRIGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQK
GRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGED
DP
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggttttatacacttccccatttcccaacagctttctgtcagttctgcattctttttcc
tggggcctgattttcccatgttactggttagcagataggcttgtggcctcttttgttcca
accacctatgaaaaacgtcaaagagcagatgatccatgctattttcatgcactctgcatc
attattaccactcccatctacttggcactgttggtagcctctcttccttttgctctgatt
ggcttcttgttgtggtccccgctccagtcagccagaaggccatatatctactccagacta
gaagacaaaaaccatgccaatggagccacactgctcacggaatggaaggctgcagggaat
gggaaaagcttctgctttggcagtgccaatgtttgtctgctgccagattctctggcaaga
tttaataatgttttcaatacacaggctagggctaaagagattggccggaggatccgaaat
ggggcaagcagaccacagatcaaaatatatatagattctcctaccaacacatccatcagt
gcagcaagttttagcagcttggtctccccccagggtggagataacactaatcgtactgtt
aatgctggcatcaaaaggacaacatcaatggagtataaaggagacaattctggctcaaac
aacagtgaggatagtagagaagataaagctggagctggagagccaaatgagggagaagaa
aacacttgcattgtccgcataaatggagaggataatggccacatgtcagacacagaaaca
gataccgtcaatggccaggctcatgccagtggcccagcagagccctcactggaaggtgac
gcagagatctcaaaaacacctaaccacaaacagaaggaaggagattctgggagtttagac
agctactctgcctcacgagagtccttagttaaagttcgcgttggagatggtacagtggac
caaagcactgtcaacaacaagctcctctacaaagcctcaatcatgaagaagacttcagtg
cggaaaaagaaacatacagatgagacctttgatcatgagatttctgctttcttccctgct
aacttggactttctgtgtttgcaggaagtgtttgacaaaagagctgcagagaaattgaaa
gagcagcttcatcactattttgaatacattgtctatgatgttggggtctacagttgccat
ggctgctgtagctttaagtttgtgaacagtggtctactttttgccagccgctatcctgtt
atggatgctgcctatcactgttaccccaatggaagaggaacagactccttggcttccaag
ggagccttgtttctcaaggtgcaagtgggaagtacacctcaggaccaaagaattgtggga
tacatctcctgcactcacttgcaagctattgcaggagatactactgttcgatgtgagcaa
ctggatatgcttcaagattggctgtctgaattcagaaaatctacctcctcctccagtaca
gccaatccagaggagctggtggcttttgatgtcatctgtggagatctcaactttgataac
tgctcctctgaggacaagctggagcaacagcattctctgtttacacactacaaagaccca
tgtcgaattggtcctggggaggataaaccatgggcaatcggtaccttgttggatcctgaa
ggattatacgatgaagaagtgtgtactccagataacctacagaaggtgctggaaagtgaa
gaaggaaggaaaggatacttagtctatcccaccagcaagaaccacagttccagtcaaaag
gggaggaaggcatcactgaaaggaaacgggaggaggattgactatatgctctatacagaa
gaaggtctctacctggaatggaaagtggaagtggaagagttcagctttattacccagtta
gcaggcttgacagaccacctacccgtagcaatgcgtctcatggtgtctacaggagaagat
gacccttaa
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