Calonectris borealis (Cory's shearwater): 142087197
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Entry
142087197 CDS
T11211
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142087197 (CHD9)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142087197 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
142087197
NCBI-ProteinID:
XP_075017254
LinkDB
All DBs
Position
12:complement(5719287..5819932)
Genome browser
AA seq
2891 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSPDNVLSPHSQFNCSPIHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNTGQDALSQPKDFMEVNVSTSHRVSVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSNFQMLHSAHPQGNFSSSKLSPVNINFPASA
GSASQISHFADPIESNGFASLDENLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQ
DSTSHVLEHDLERHITPQQVTQSPDFVRAQSQSQIHPWHSSVSNQHLQDRSRVTVQGQPP
SSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEDKKGRKVKSKPKDKESKKPKTGASSKIKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVKI
KKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEVSAGMTVETEEFFVKYKNYS
YLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSLC
EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNS
WKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILL
AGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYYRDSQGRIVR
GTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLL
TGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCC
NHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIF
SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKL
GLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSLV
IDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLV
YGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQ
TRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHC
NKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSLL
IGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMF
KDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQI
QPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRF
DWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRT
LYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDY
HILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFED
TKAKNENLKEDPQSSEEESMSTEETQTIMKSEPLSPKNGTPIQNTDHKPSVKTETDRRMV
AARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVAS
LSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPS
ARRSYDSNSVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVRE
KEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPK
SLPESGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINSC
QVAAGINPAVTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVED
SGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKAT
AAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTGG
EAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEADIKKERTEDQNT
DTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDV
QNSESNDTGSVKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSS
SSEDSDSSDED
NT seq
8676 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttaggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcacctgacaacgtcttatcaccacactctcaattc
aattgttcaccaattcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcacaacaa
agcagaaacaacacggggcaagatgctctgagtcagccaaaagacttcatggaagttaac
gtatctacttctcacagagtcagtgttaaccacccacctccagtttctaatccatcaact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
aataacagccaacaattttcatctccttattcttactctaataaccacatttctcctacc
agccttcttcagtctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgccttcacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaaattttcaaatgttgcattctgcgcatcct
cagggcaacttcagtagttcaaaactctctcctgtgaatattaattttccagcttctgct
ggttctgcttctcagataagccatttcgctgaccctatcgaaagcaacggttttgcatct
ttagacgagaacttacttcatcaggtcgagactcataacgaaccatttacaggacttgac
ccagatgacctccttcaggaagaccttctgccacagttcgatgattctgcatttgttcag
gatagcacaagccatgttttagagcatgacctagaacgccatataactccacagcaagta
acacagtcacctgattttgttcgggcacagtctcaaagtcagatccatccttggcattct
tcagtttctaatcagcatctgcaagacagaagtcgtgtaaccgttcaaggacagcctcct
tcctccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtgagg
gcaatgtctgaaaagaagcagaagaaaaaagcagactcagaaagtaaacaagagaaggca
aatcgcataatatctgaagcgattgcaaaagcaaaagagagaggagagagaaacattcca
cgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggataagaag
ggtagaaaagttaaatccaaaccaaaggacaaggagagcaaaaaaccgaaaactggtgcc
tcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcacgctgggtaagaag
cagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcagactccgcagcgg
ccattgaaagatgaagactcacagaagagaagatcaaatcgtcaagtaaaaaggaaaaaa
tatgctgaagaaggagaaggaaaacagtcagaagaagaagctaaagtttctgtgaaaatc
aaaaagaattctgcccctttacctgctgaacagcctttacaattatttgtggaaaatcca
agtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaagaa
gtatctgctgggatgacagtagaaacagaagagttttttgtaaaatacaagaactactct
tacctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccagcag
aaaataaaacgattcaaactaaggcaggcacaaagagctcacttttttgcagatatggaa
gaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatctctttgt
gaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcgttgcca
tatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaattt
gaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaactcc
tggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatatcaa
ctggaaggacttaactggctcctattcaactggtacaataggcgaaattgcattttagcg
gatgaaatgggtcttggcaaaaccattcagtcaattacattcctctatgaaatcctcctg
gctggtataagagggccttttctgatcatagctccgctttccactataacaaactgggaa
agagaatttcgcacgtggactgaccttaatgttgtagtgtatcatggaagtatgatcagc
aggcagatgattcagcagtatgaaatgtactacagggactcccagggacgtatcgttcga
ggtacctacagattccaagccattatcacaacttttgaaatgattcttggtgggtgtcca
gagttaaatgcaattgaatggcgatgtgttattattgatgaagctcacagactgaagaac
aaaaattgcaaactcttggaaggactaaaactgatgaaccttgagcataaagtgctgtta
acgggtaccccactgcagaacacagtagaagaattatttagcctccttcattttcttgaa
ccactgcgttttcctgctgaatctacattcatgcaagaatttggagaccttaaaacagag
gaacaggttcagaaactacaagctatcctgaaacccatgatgctcagacgattaaaggaa
gatgtagaaaaaaagctggctcctaaggaggaaactataattgaagtagaactcactaat
attcagaagaaatattatcgagcgattttggagaaaaattttgctttcttatccaaagga
gcagggcaagcaaatgtacccaatctggttaacactatgatggaactgagaaagtgttgt
aatcacccttatctcatcaaaggtgctgaagagaaaatccttggagagtttaaagaaacg
tatagcccaagcgctcctgacttccatctgcaagcaatgatccagtctgctggtaaattg
gttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtcctcatcttc
tctcagatggtgcgctgccttgatattttggaggattaccttatacataaaagatactta
tatgaacgaattgatgggcgagtacgagggaatctcagacaagctgcaattgaccggttc
agcaaaccagattccgatcgctttgtcttccttctgtgcaccagagctggtggtttgggc
attaatttgactgcagcagatacgtgtataatttttgattctgactggaatcctcaaaat
gatctgcaggctcaagcgcgttgtcacaggattggtcagaacaaagcagtgaaggtctac
agactaataacgcgtaactcctatgaaagggagatgtttgacagagcaagtctgaaactg
ggactggataaggctgtcttacagagtatgagtggaagagaaaacagtgtcggtggtatc
caacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcatatggtgccatt
atggatgaagaagatgaaggctctaaattctgtgaggaagacattgaccaaattttgcag
cgtcgtactaaaactatcacaattgaatcagaaggaaggggctccacatttgccaaggct
agttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctggcag
aaatgggccaaaaaagcagaaatagatatagaggctatcagtggtagaaacagcctggtt
attgataccccaagaattaggaaacaaacacggcccttcagtgctacaaaagatgagctg
gccgagttgtctgaagtggagagcgagggtgatgataaaccgaaactccgcaggccttgt
gaccgttccaatggatacggaagaactgagtgctttcgggtggaaaaaaacttgctggtc
tatgggtggggtcgatggagagaaattttgtcacatggtcgcttcaagagacagctgaat
gaacaggatgtggagataatttgccgagctctgttagcctattgtcttgtccactacaga
ggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaggatgggcaa
acacgagagttacagaatcaccttggcttatcagcccctgtgcctagaggaagaaaagga
aaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcgaaaa
tacaatccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacaccattgc
aacaaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattggtaat
gaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtttgggtccctgag
ccagatcactctgaagttcctgctgagtggtgggatgcagatgcagataaatcccttcta
attggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagcgctg
tgcttcttggaaagggttggcaagccagatgaaaaagcagttgctgcggaacagagagca
aatgattatattgatggggatgtagaagatccagaatacaaaccagcaccagcaatgttt
aaagatgacatagaggatgatgtttcatccccaggtgatctagtaatagcagatggagac
ggacaaatgatggaaggagacaaaatctattggcccactcagtctgccttaacaacacgt
cttcgccgcctaataacagcttatcaacggacaagtaaaaataggcaggctcagcagatc
cagccagcattcccaatacaaactagtatgatgcagcctccgtatgaagaagctgctcta
aatccaaagatggctgctaagattgaaagacagcaaagatggacgagaagagaagaagct
gacttttacagagttgtgtccacatttggagtagtgtttgatcctgaaagggggcgattt
gactggaccaaatttcgagcaatggccagactacataagaaaactgatgagagcttagag
aagtacttgtatgcatttatgtcaatgtgccggagagtctgtcgtctcccctcaaaagaa
gaactcgtagacccaaacatttttatccaaccaattacagaggagcgtgcttctcggact
ttgtatcgcattgaactcctacggaaagtgcgagaacaggctcttagacacccacagttg
tttgaacgactaaaactatgccagccaaacccagacttacctgtctggtgggagtgtggg
actcatgacagggatttacttattggagctgctaaacatggagttagcaggacagattat
catattcttcgtgatcctgaactctcatttatgtctgcccagaggaactataatcaaaat
aaagtggcactctcaaggacttctactccactcttgcatcagtaccagatggcattatct
gcttctcctcttacacctcagtcaagattgtcagacgctaaagtgaatgcttttgaggac
acaaaagctaaaaatgaaaatctgaaagaggaccctcagtcgtctgaagaggaatctatg
tctacagaggagacacagacaataatgaaatctgaacctttgagtccaaaaaatggcaca
ccaatacaaaatacagaccacaaacctagtgtgaagactgaaacagacaggcgcatggtg
gcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagcaaa
aggggatctgactctagctctgactcggactctgactcagatagatcatcctgttcttcc
aggtcatcttcttcatcctcttcgtcttcctcatcttgttcacactctcgatcaggctct
agctcttcatcatcttcatcttgttcttcagcatcttcatcctcatcctcatcatcctca
tcatcgtcgtcatcatcatcatcatcgtctgaagagagtgatagtgatgaagaggaggca
caaaaacgtgcagaaggaaccccgcatataaaagcatatgatgaagagagtgtagcctct
ctgagtacaacacaagatgagacgcaagacagtttccagatgaacaacgggacaccaaat
tccagttacctcctacaaggtggatacatgttggctgcatcctactggccaaaggatcga
gttatgattaatcgacttgatagtatttgtcaaacagtgttgaaaggtaaatggccttca
gcaagaaggagctatgacagcaattcggtggcatctttctatacaaccaaacttctggat
agcccaggtgcagctgcagattacagtgagcccagcgcaccaacaccccctcttgcaggt
gttaaagaagaatatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcag
ggactgtctcagaaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaatac
ctggctcggctacgtgaactccagaatgcttcagaaaccagccttgtcaacttcccaaaa
tcacttcctgaatcaggtacttccagtcacttaacagccagtgccaatggagtcatagtt
gacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggagggagtcgat
gtcctctttataaatagaaataaacagcccaatcatgttaatccaggtattaactcctgt
caagttgctgcaggaataaacccagcagtcacttacacgcagtcccaaggcatgcttgat
gcagagagtccagttcctgttattaacctaaaagatggaacaagacttgcaggtgatgat
gcccccaaaagaaaagatttagaaaggtggcttaaagaacatcctggatacgttgaagac
tcaggagcttgtattcctaggatgcagctgcatgatgggaggcccaaacaaaaaagacac
cgttgtcgaaaccctaataaactggacgttaatagtttgactggtgaagaacgtgttcag
ctcataaatagaagaaacgcaagaaaggttgggggtgcatttgctccccctctgaaggat
ttgtgcaggttcttgaaagaaaatccagaatatggagtggctcctgaatggggagaagtt
gtaaaacaatctggatttcttccagaaggtatgtttgaccgtattctcactggacctgtt
gtgcgggaagaagtaagccggcgaggaaggcgccccaaaagtgagattgctaaggcaaca
gcagctgcagcagctgccaccgctgcaagcgtatcagttaaccctctgctagctaatgga
ttgcttccaggagtggatctgcctagtcttcaggccttacaacaaaacctgcaaaacctg
cagtcgctgcaagtaacagcaggattaatgggaatgccagctggcttaactactggagga
gaagcgaagaacatggctgccatgttccccatgctgctgtcagggatggctggattacca
aacttgctgggcatgggaggacttctaacaaagtctacagaatctatttcagaggaaaaa
aagggaagcgattcaaaggaggcagatataaagaaagaaaggacagaagaccaaaataca
gatactggtggtgaaaactctgtttcaagttctccttcaacatcctctgctgctgcagct
gccaatcctctctctcttaacccattacttttgtccaacatactttacccagggatgctt
ctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgatgta
cagaacagtgaaagcaatgacacaggctcagtcaagcccacagaagagaaggaggaaaat
tctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaaaac
agcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcgtct
tcatctgaggattcagattctagcgatgaagactga
DBGET
integrated database retrieval system
