Calonectris borealis (Cory's shearwater): 142087201
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Entry
142087201 CDS
T11211
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04217
Necroptosis
cbor04622
RIG-I-like receptor signaling pathway
cbor04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
142087201 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
142087201 (CYLD)
04625 C-type lectin receptor signaling pathway
142087201 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbor01002
]
142087201 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142087201 (CYLD)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142087201 (CYLD)
Peptidases and inhibitors [BR:
cbor01002
]
Cysteine peptidases
Family C67
142087201 (CYLD)
Ubiquitin system [BR:
cbor04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142087201 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
142087201
NCBI-ProteinID:
XP_075017269
LinkDB
All DBs
Position
12:complement(7024686..7051956)
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AA seq
954 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDDKFPGVVRFRGPLLQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRGGGDKSLFNHSKPKATGSTSEPGNRNRSEVFYTLNGSS
VDSQPQTKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTSSVSTENRFHSLPFS
LTKTSSTNGTIGHSPLSLSVQSVIGDVNATANQESPSTAGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPK
DLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggcttatggagtcaagaaaaagcaagttcctcctattgggaagagcggata
ttttacttgcttctccaagaatgcagtgttatagacaagcagacacaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaaggcaagaaactgcagattggattaaagattctggaacaacctcat
gcaattctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttttggccattactaactgtgaggaaagatacagtctgtttaaaagcaaaagcaggtta
actaagggcatccaaatagatattggctcgcctgttagagtacagctgagatcaggagat
gataaatttcctggagttgttcgcttcagaggacccttattgcaagaaaggtccctaaca
gggatatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaggtggtggtgacaaaagcttgttcaaccatagtaagccaaaggctacaggatct
acctctgaacctggaaatagaaacagatctgaagtcttctacacattaaatggctcatca
gttgactctcagcctcagacgaaaacaaaacccccatggtatattgatgaagttgctgaa
gaccctgcaaaatcacttactgattcatctcccggatttggacattcttcaccaccactc
cagccacctttaacaagctctgtgtctacagaaaacagatttcactccctcccttttagc
ttgacaaaaacgtcaagtactaatggtactattggacatagtcctctctctttatctgtt
cagtcagtcattggtgatgtaaatgctacggctaaccaagagagtccatcaacagcaggc
ccagtcgggaactcgcatggtcttgaagcaggttccttggctgaagttaaagaaaatcct
cctttctatggagtaatccgctggattggccagccccctggagtaaatgaagtattagca
ggactggaactggaagatgaatgtgcaggttgtacggatggaacatttaagggaactcga
tacttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgcaggccggat
tccaggtttgcctccctacagcccgtttccaaccagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttac
ttagactccaccttattctgcctgttttcttttagctctgttttggacactgtgttactc
agacctaaagaaaagaatgacgtagagtattatagtgagactcaagaactgttgcgaaca
gagattgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactg
aggaaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatcca
gaagaatttttgaatattttatttcatcatattttaagagttgagccactgttgaaaata
agatcagcaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaat
gagaaagttggagtcccaacaattcagcagttactagagtggtcattcatcaacagcaac
ttgaagtttgcagaggcaccctcttgtctgattatccagatgccacggtttggaaaagac
ttcaaaatgttcaacaaaatttttccctccttggaattaaatataacagacttacttgaa
gatactcccaggcagtgccgtatatgtggagggcttgctatgtatgagtgcagagaatgt
tatgaagatactgatatttctgctgggaaaatcaagcagttctgcaaaacctgcaatacg
caagttcatcttcatcccaagagacagagtcataaattcaatccattgtcactacctaaa
gatctgccagactgggattggcgacatggctgcatcccgtaccagaagatggagttgttt
gctgttctctgcatagaaacaagccactatgtagcttttgttaaatacgggagggatgac
tccgcctggcttttctttgacagcatggcagatcgggatggaggtcagaatggctttaac
attccgcaagttaccccatgtccagaagttggtgaatacctgaagatgtctctagaagaa
ttacactcactggattccagaaaaattcaaggttgtgcacgaagactactttgtgatgct
tacatgtgcatgtatcaaagtccaacgatgagtttatacaaatga
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