Calonectris borealis (Cory's shearwater): 142087228
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Entry
142087228 CDS
T11211
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04115
p53 signaling pathway
cbor04120
Ubiquitin mediated proteolysis
cbor04137
Mitophagy - animal
cbor04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142087228 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142087228 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
142087228 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
142087228 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142087228 (SIAH1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142087228 (SIAH1)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
142087228 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
142087228
NCBI-ProteinID:
XP_075017326
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All DBs
Position
12:8431583..8455011
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AA seq
313 aa
AA seq
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MTGRSVSSFLHSWKGVLCACLPGGKTSKGKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagatctgtctccagctttctgcattcgtggaagggggtcttgtgtgcatgc
ttgccgggaggtaaaaccagcaaggggaaagaaatgagccgtcagactgctacagcacta
cctacaggtacttcaaagtgtacgccatcacagagggtgcctgcactgactggcactaca
gcttccaataatgacttggctagtctctttgagtgtcctgtatgttttgactatgtgctg
ccaccaattcttcagtgtcagagcggccatcttgtttgtagcaactgtcgccccaaactt
acgtgctgtccaacttgccgaggcccgctgggctccattcgtaacctggctatggagaaa
gttgccaattctgtactattcccatgtaaatatgcctcttccggatgtgagataactttg
ccacacacagaaaaagcagaccatgaggagctgtgtgagtttaggccttattcctgtcca
tgtcccggtgcttcatgtaaatggcaaggttctctggatgctgtaatgccacatctgatg
catcaacataagtcaattacaacacttcagggagaagatatagtgttccttgctacagac
attaatcttcctggtgctgttgactgggttatgatgcagtcttgttttggctttcatttc
atgttagtattggagaaacaggaaaaatatgatggtcaccagcagttctttgcaattgta
cagctgataggaacccgcaagcaagcagaaaactttgcttatcgacttgagttaaatggt
cataggcggcgattgacttgggaagcaactcctcgatctattcacgagggaattgcaaca
gccattatgaatagtgactgtctagtctttgacaccagcattgcacagctctttgcagaa
aatggcaatttaggcatcaatgtaactatatccatgtgttga
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