Calonectris borealis (Cory's shearwater): 142087288
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Entry
142087288 CDS
T11211
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142087288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142087288
03036 Chromosome and associated proteins [BR:
cbor03036
]
142087288
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142087288
Coactivators
SAGA/TFTC/STAGA complex
142087288
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
142087288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
142087288
NCBI-ProteinID:
XP_075017482
LinkDB
All DBs
Position
12:complement(12502244..12651387)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSAPCQQQQPQQ
QHQGSLAGGSSPVRQQQGHPAPLPAPGAEEPAGCPGAAESRAPAQGPLPSPSPPAAAAAA
AAAAAAAGRGASVNSSSVQQSHGAALLSSGGSSPGAPAAPAPPEPAAPPPAGAPAQPVNN
HVVAGAAARDAGSPSPGGSPPAADSAPPQRAEAAAAAGGSGTPAGGGGPAGAAEGAAAAA
TAPLPGEAAPNGEGAGGRPAAVPPVSSHGRADAATAQTKPAHGPLPAVNALSNSASPAPA
AAGAAAPPGQGSVANCAPPAAAAPGAAPKPAVSAAGVAKAGAALPVAPAAPQALSPRPAL
GAAPRIVAPQLIVRPPQQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQV
QTQGQGPTSISPRLSVPTTGPVFRLSTTQQPTSVATSTVRLGLPVQAKVVQSTATPVSAT
SAATLPGGSILSHTTVSVATTSAQNLFKTTVATGTSASQQPAVITGGQTQASAQNQGQPR
LPLPPHTTAQVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPET
SRNVKALVQDLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVL
QGQPSQQSLQQTKLSQVIPQSASGSISSVVTTQAIGIRQPNNICTVSVSNTVQPPQVKVV
QSNQSSQLQIIQSTSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGG
FGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSC
KDEPFLAAIPLHKRVLEMAKKLGITDVPAEVVTFISHATQTRLRTVIEKVTVITQHRMES
YKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQK
AKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGLLTIGGEGLGMSGGSQAGLGTPS
SRQYARQKITRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgcctcggaccccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccttggaatcgcagctggccgggggccggggc
tccgccgaggcgccccagcccaggacctccgccccgtgccagcagcagcagccgcagcag
cagcaccaggggagcctagcggggggcagcagccccgtccggcagcagcaagggcatccc
gcgcctcttcccgctcccggggcagaggagccggcggggtgccccggagccgcggagagc
cgagctcctgcccaggggccgctcccgtccccgtcccccccggcggcggcagcggcggcg
gcggcggcagcggcggcggcagggaggggagcgagtgtaaacagtagtagtgtgcagcaa
tcacatggagcggctctcctcagcagcggcggcagcagccccggcgcgcccgccgcccct
gccccgccggagcccgccgcccccccgcccgccggcgcccctgcccagcctgtcaacaac
catgtggttgccggcgccgctgcccgggacgcggggagccccagccccggcggcagcccg
cccgccgccgacagcgcgccgccgcagcgcgccgaggccgcggccgccgcgggggggagc
gggaccccggcggggggcggcgggccggcgggagcggcggagggcgccgccgccgccgcg
accgcgccgctccccggcgaggcggcgcccaacggggagggcgccgggggccggccggcg
gcagtcccaccagtcagcagccacggcagagccgacgccgccacagcacagaccaagccc
gcgcacggcccgctccccgcagtaaacgcactcagtaactccgccagccccgcgcccgcc
gctgccggcgcggccgccccgccgggacagggctcggtcgccaactgcgccccgccggct
gccgcggcccccggcgccgcgcccaagccggcggtcagcgccgcgggcgtcgccaaggcg
ggagctgcgctgcccgtcgcccccgcggccccccaggccctctcgcccaggccggcgctg
ggcgctgcccccaggatcgtggccccccagctgatcgtgaggccgcctcagcagaccacc
atccagctgccccccggcttcactatcccgcctggtatggtcttggtgcgcacagacgct
ggacagcttgtaatggtgcctcagcaggctctagcacaggctcaaatgcaggctcaagta
caaacgcagggacaaggtcctaccagcatttcacctagactttcagtgcccacaactggc
cctgtttttcgcctatcaacaactcagcaaccaacttctgtagccacatctactgtccgc
ctcggacttccagtgcaggccaaagttgttcagtcaactgctacacctgtcagtgctacg
tctgctgcgactctgccaggaggctctattctttcacataccacagtatcagtagctaca
acaagtgctcaaaatttattcaagacaacagtagcaactggaacatcagcttctcaacaa
cctgcagtaattactggtggacaaactcaagcttcagcacaaaaccagggtcagcctcgg
ctgccacttccacctcatacaacagcacaagtaccagcacagccccaggtcataccaagc
tctcctgtacctggaactacagttgtatcacaggaaatgcaagagaatgtgaaaaaatgc
aaaaactttttagctacccttataaaacttgcttctcacaattcaccatctccagaaacg
tcccgtaatgtgaaagctctggttcaggatttgttggatgcaaagatcgatccagaagaa
tttacaggccgccttcaatcggaactcaaatcatctcctcagccatatcttgtacctttc
cttaagaaaagtctacctgcactgagacaatctttactgaatagtcaacattcagttttg
caaggacagccgtctcagcagtcacttcaacaaaccaagctatcacaagttatacctcag
tctgcctctggaagcatttcctctgttgtcacaacgcaggcaataggaataaggcaacca
aacaacatttgcacagtctctgtatcaaatacagtgcagcctcctcaggttaaggtggta
cagtcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaa
cgaaaccctgcttgccagactacccagattaggatgccagtggtaataactcagaccatt
agaccacaaggcacagtagggaaggcaccaacaatacaagccagcaaaagtcctgggggc
tttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttct
ttcagagatgatgatgacatcaatgatgttgcctctatggctggcgttaatcttaatgaa
gaaagtgcccgaattatggctaccaactctgacttggttggaacccagatacagtcctgt
aaagatgaaccctttcttgctgctatacctctacataaacgcgtacttgaaatggctaaa
aaactaggaattactgatgttccagctgaggtggttacttttatttcccatgcaacacaa
accagattaagaacagtgatagaaaaagtaacagtgataacccagcaccgaatggaatcg
tacaaagatgatgaatggtacgaacaagctacagatgtccgatcacagttaaagtttttt
gaacagttggagcgtttagaaaagcaaaggaaagacgaacaagagagggaaatcttgcta
aaggctgccaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaaaaa
gcaaaggagatgcagcaacaagaacttgcacaaatgaggcagagggatgccaatctaact
gcattggcagctatcggtccccggaagaaacggaagcttgattcacctggactgcttacc
ataggaggagagggcctcggtatgtccggtggaagtcaggctggcttggggactccttca
tccaggcagtatgcacgacagaaaataactcgcgtaaacctcagggacttcatcttctac
atggaacaggaaagagaaacgagccattctctcctgctctatcgagctctgcttaaataa
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integrated database retrieval system
