Calonectris borealis (Cory's shearwater): 142087319
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Entry
142087319 CDS
T11211
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04514
Cell adhesion molecules
cbor04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142087319 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
142087319 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142087319 (CDH5)
04090 CD molecules [BR:
cbor04090
]
142087319 (CDH5)
Cell adhesion molecules [BR:
cbor04515
]
Cadherins
Major cadherins
142087319 (CDH5)
CD molecules [BR:
cbor04090
]
Proteins
142087319 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
LysM2_NFP
Motif
Other DBs
NCBI-GeneID:
142087319
NCBI-ProteinID:
XP_075017544
LinkDB
All DBs
Position
12:complement(13422178..13453926)
Genome browser
AA seq
772 aa
AA seq
DB search
MNHLILLFSLFLAPAFADKESQKTNQNFSSKNASHKRLKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRRN
NQSLEPPSKFIIKVYDINDNVPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVTGHA
TVTYQVIKGDEYFTVDDSGVISTTRADLDRENQSTYEIIVKAKDAPGSSGDSSTATVVIT
LTDINDNFPVFKHPLFHFKVPENISVGGEVGRVKVEDVDEPQHRNTKYSFVRGDYRDTFE
IVANPFTNEGIIRPKKPLDFEKVAEYRFDIEATDPTVDLRYFKSGGSRSISTVTIEVTDV
DEPPVFTKLPYEFKVRENDPEIRTLGSVWAHDPDAAKRKIRFIRRRASPNGDYIRVSDTG
IIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVTDENDNAPELVYPEEP
RVCENAAPGKVIIRISATDKDEISPRGFFKYSLATEDSNFSLVENYDNTANITVKYGQFN
RELAKIHYLPVIISDNGDPELSSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FICIFTIIVITLLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGIKPEAVPSPYAQVQKPPGNITSGAGEMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccttattctacttttctcattgttcttggctccagcatttgctgacaaagaa
agtcagaaaacaaaccaaaacttttcttcaaaaaatgccagtcataagcgactgaagaga
gactggatatggaaccaaatgcatatcaaagaagagattgatacaccattaccacaccat
gttggcaagatcacatcaagtgtaaggaacaacaacgctaagtatattattgaaggtgaa
tatgccaacaccatttttaaagtggaagaaaccagtggtgacgtatatgcatttgagagg
ctagacagagaaaagaaagcagagtatgagctgacagctctcattattgaccgaagaaac
aaccagtcactggaacccccatctaaattcattatcaaggtttacgatattaatgacaat
gtccctgtgtttgtacaaaaagtattcaacggatctgtcccagaaatgtcaccagtagga
acctcagtcaccaaagtgacagctgtagatgctgatgacccaacagttacaggtcatgcc
acagttacctaccaagtcattaaaggagacgaatacttcacagttgatgactctggtgtg
atttctacaacaagggctgatttagacagagagaatcaatcaacatatgaaattattgtt
aaagcaaaagatgcgccagggtcttctggggattcaagcacagctacagtcgttatcact
ttaactgacatcaatgacaacttcccagtattcaaacacccattatttcacttcaaagtt
cctgaaaacatttcagtaggaggagaagttggcagagtcaaagtagaagatgttgatgaa
ccacaacatagaaatacgaaatacagttttgtcagaggagattacagggacacctttgaa
attgtagcaaatccatttacaaatgaaggaatcattaggccaaagaagcccctggacttc
gaaaaagtagcagaatacaggtttgacattgaagcaacagatcccacagttgatcttcgc
tattttaaatccggtggctctaggagcatttcaacagtcaccattgaagtcactgatgtt
gatgagcctcctgtcttcactaaactaccatatgaatttaaagtaagggaaaatgaccca
gaaataagaacacttggttcagtttgggcacacgaccctgatgcagctaaacggaaaatc
agatttattcgacgaagggctagtcctaatggagactatattagggtatccgatactgga
attattcaacttcctaagcccctggacagagaattcagttcctcatacaacatcactgta
gcagctcaggaaatccttgaagatggccgtctttctgacagagaatcacatgcccaagtt
cacgtaatagttactgatgaaaatgataatgctccagaacttgtctatcctgaggaaccc
agagtgtgtgaaaatgctgcaccaggaaaggtaatcatcaggatttcagctactgacaag
gatgaaatatcacctagaggtttcttcaaatactccctggccacagaagatagcaacttc
tccttggttgagaactacgataacacagctaatatcactgtcaaatatggacagtttaat
cgtgaacttgccaaaatccactacctgcctgtcatcatctcagacaacggtgatcctgag
ctcagcagcacaaatacacttgtcatcagtgtctgcaagtgtaatgaaaaaggcaacttc
actttttgtgaggaaagagctaaacaagttggagttagtatacaagcactggtggcaatt
tttatctgtatcttcacaatcattgtaatcacattgctaattcttctaagaaagagacac
aagaaggatttgagcggtcttgggaggaatgtggcagagattcatgagcagcttgtcact
tatgatgaagaaggtggtggtgaaatggataccaccagctatgatgtatctgtactcaac
tctgtccgcaagaatggtataaagccggaagcagttccctctccatatgcacaagtccaa
aagcctcctggaaatataacttctggtgctggagaaatggaaatgatgattgaggttaag
aaggatgaagccgacaatgacagggatttgctgccatatgacacacttcacatttatggc
tacgaaggtgccgagtccattgcagaatctctcagttctttggaatcaggctcctcagac
tcagatattgattatgactttctaaatgactggggacccaggtttaaaatgttagctgag
ctgtatggatcagaaccaaatgaagattttgtgtattaa
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