Calonectris borealis (Cory's shearwater): 142087609
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Entry
142087609 CDS
T11211
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142087609 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142087609 (CSTF2)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142087609 (CSTF2)
U7-dependent histone pre-mRNA processing factors
142087609 (CSTF2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142087609
NCBI-ProteinID:
XP_075018079
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All DBs
Position
13:7559938..7567180
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AA seq
595 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGGGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVMEPRGLEP
RGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGG
FSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggaccgctccctgcgctccgtattcgtg
gggaacatcccgtacgaagccacagaggagcagctgaaggacattttctcagaggttggg
cctgtggtcagctttaggctggtgtatgacagggagacaggaaagccgaagggctatggc
ttctgtgagtaccaagaccaggagacggccctcagtgccatgcggaacctgaacgggcga
gagttcagcgggagggccctgcgcgtcgacaacgcggccagcgagaagaacaaggaggag
ctgaagagcttgggcacaggcgcacccatcatagagtcaccctacggggaccctgtcaat
cctgaagacgcccccgagtccatcagccgggccgtagccagcctgccgcccgagcagatg
tttgagctgatgaagcagatgaagttgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccccagctggcttatgccctgctgcaggcccaggtggtcatgagg
atcgtcgacccagagatcgcactgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcagccagtgccagggccggggcctggaccgggaccggggcctggc
ccagggccaaacgcccagctgaacccgcagaataccccctcgtcccagccacagcccata
ggtgggatgcacgtaaacggcgctcctcctctgatgcagccgcccatgcagggaggagtg
ccggccccaggacagatggcagcccctgtgcagggcccgggccctggccccatggctcca
ggaggtgggatgcagccgcaggttgggatgccgggcggagggcctgtccccctggagcgc
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gtccaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
gtcggaagagatccccgagggctggagccacgaggattggagccgcgagggctggagccc
cgggtgatggaggcgcgagccctggaggcacgaggcctggagccgcgggtcctggagcca
cgagtgctggaagccagggccatggaggccagggtcatggagccccggggcctggagcct
cgagggccaggtcccaacccacgtggccccatgcctggtgggatacagggtcccgggccg
cttaacatgggagccagtggcccgcaggggccccgccaggttcctaacatggcaggggca
ggcatgcagggaggaggcattcctggggcaggagtccaaggagccggtcagcccggaggc
tttagccctggacagagccaggtcaccccccaggatcacgagaaggcagccctgatcatg
caggttctgcagctgacggcggaccagatcgccatgctgcccccggagcaacggcagagc
atcctcattctgaaggagcaaatccagaagtccacgggggcaccctga
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